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Parent-specific copy number in paired tumor-normal studies using circular binary segmentation.
Adam B. Olshen, Henrik Bengtsson, Pierre Neuvial, Paul T. Spellman, Richard A. Olshen, and Venkatraman E. Seshan Bioinformatics 27(15):2038-2046 (2011)
to dblp by dblp on Aug 8, 2011, 12:00 AM
URL | BibTeX
Editorial: The Future of Publishing Microarray Data.
Paul T. Spellman Briefings in Bioinformatics 2(4):316-318 (2001)
to dblp by dblp on Jun 29, 2011, 12:00 AM
URL | BibTeX
An open letter to the scientific journals.
Catherine A. Ball, Gavin Sherlock, Helen E. Parkinson, Philippe Rocca-Serra, Catherine Brooksbank, Helen C. Causton, Duccio Cavalieri, Terry Gaasterland, Pascal Hingamp, Frank Holstege, Martin Ringwald, Paul T. Spellman, Christian J. Stoeckert Jr., Jason E. Stewart, Ronald Taylor, Alvis Brazma, and John Quackenbush Bioinformatics 18(11):1409 (2002)
to dblp by dblp on Jun 29, 2011, 12:00 AM
URL | BibTeX
The Stanford Microarray Database.
Gavin Sherlock, Tina Hernandez-Boussard, Andrew Kasarskis, Gail Binkley, John C. Matese, Selina S. Dwight, Miroslava Kaloper, Shuai Weng, Heng Jin, Catherine A. Ball, Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein, and J. Michael Cherry Nucleic Acids Research 29(1):152-155 (2001)
to dblp by dblp and 2 other users on Jun 29, 2011, 12:00 AM
URL | BibTeX
Comparison of sparse coding and kernel methods for histopathological classification of gliobastoma multiforme.
Ju Han, Hang Chang, Leandro A. Loss, Kai Zhang, Fredrick L. Baehner, Joe W. Gray, Paul T. Spellman, and Bahram Parvin ISBI, page 711-714. IEEE, (2011)
to dblp by dblp on Jun 22, 2011, 12:00 AM
URL | BibTeX
Minimum-Weight Two-Connected Spanning Networks.
Clyde L. Monma, Beth Spellman Munson, and William R. Pulleyblank Math. Program. (1990)
to dblp by dblp on May 27, 2011, 12:00 AM
URL | BibTeX
Spectral Decomposition of Signaling Networks.
Bahram Parvin, Nirmalya Ghosh, Laura Heiser, Merrill Knapp, Carolyn L. Talcott, Keith Laderoute, Joe W. Gray, and Paul T. Spellman CIBCB, page 76-81. IEEE, (2007)
to dblp by dblp on Aug 11, 2010, 12:00 AM
URL | BibTeX
Prediction of epigenetically regulated genes in breast cancer cell lines.
Leandro A. Loss, Anguraj Sadanandam, Steffen Durinck, Shivani Nautiya, Diane Flaucher, Victoria E. H. Carlton, Martin Moorhead, Yontao Lu, Joe W. Gray, Malek Faham, Paul T. Spellman, and Bahram Parvin BMC Bioinformatics (2010)
to dblp by dblp on Jul 21, 2010, 3:41 PM
URL | BibTeX
GenomeGraphs: integrated genomic data visualization with R.
Steffen Durinck, James H. Bullard, Paul T. Spellman, and Sandrine Dudoit BMC Bioinformatics (2009)
to dblp by dblp on Jul 21, 2010, 3:41 PM
URL | BibTeX
A Status Report on Mage.
Paul T. Spellman Bioinformatics 21(17):3459-3460 (2005)
to dblp by dblp on Jul 21, 2010, 3:41 PM
URL | BibTeX
Integrated analysis of breast cancer cell lines reveals unique signaling pathways.
Laura M Heiser, Nicholas J Wang, Carolyn L Talcott, Keith R Laderoute, Merrill Knapp, Yinghui Guan, Zhi Hu, Safiyyah Ziyad, Barbara L Weber, Sylvie Laquerre, Jeffrey R Jackson, Richard F Wooster, Wen Lin Kuo, Joe W Gray, and Paul T Spellman Genome Biol. 10(3):R31 (2009)
to imported by denilw on Jan 26, 2010, 8:35 PM
DOI | BibTeX
A collection of breast cancer cell lines for the study of functionally distinct cancer subtypes.
Richard M Neve, Koei Chin, Jane Fridlyand, Jennifer Yeh, Frederick L Baehner, Tea Fevr, Laura Clark, Nora Bayani, Jean-Philippe Coppe, Frances Tong, Terry Speed, Paul T Spellman, Sandy DeVries, Anna Lapuk, Nick J Wang, Wen-Lin Kuo, Jackie L Stilwell, Daniel Pinkel, Donna G Albertson, Frederic M Waldman, Frank McCormick, Robert B Dickson, Michael D Johnson, Marc Lippman, Stephen Ethier, Adi Gazdar, and Joe W Gray Cancer Cell 10(6):515-27 (2006)
to imported by denilw and 1 other user on Jan 26, 2010, 8:35 PM
DOI | BibTeX
Systematic variation in gene expression patterns in human cancer cell lines.
D T Ross, U Scherf, M B Eisen, C M Perou, C Rees, P Spellman, V Iyer, S S Jeffrey, M Van de Rijn, M Waltham, A Pergamenschikov, J C Lee, D Lashkari, D Shalon, T G Myers, J N Weinstein, D Botstein, and P O Brown Nat. Genet. 24(3):227-35 (2000)
to imported by denilw and 1 other user on Jan 26, 2010, 8:35 PM
DOI | BibTeX
Comprehensive identification of cell cycle-regulated genes of the yeast Saccharomyces cerevisiae by microarray hybridization
P T Spellman, G Sherlock, M Q Zhang, V R Iyer, K Anders, M B Eisen, P O Brown, D Botstein, and B Futcher Mol Biol Cell 9(12):3273-3297 (December 1998)
to micr by cchen63 and 2 other users on Nov 19, 2009, 10:00 PM
URL | BibTeX
A simple spreadsheet-based, MIAME-supportive format for microarray data: MAGE-TAB.
Tim F. Rayner, Philippe Rocca-Serra, Paul T. Spellman, Helen C. Causton, Anna Farne, Ele Holloway, Rafael A. Irizarry, Junmin Liu, Donald Maier, Michael Miller, Kjell Petersen, John Quackenbush, Gavin Sherlock, Christian J. Stoeckert Jr., Joseph White, Patricia L. Whetzel, Farrell Wymore, Helen E. Parkinson, Ugis Sarkans, Catherine A. Ball, and Alvis Brazma BMC Bioinformatics (2006)
to dblp by dblp on Nov 10, 2009, 12:00 AM
URL | BibTeX
A single-sample method for normalizing and combining full-resolution copy numbers from multiple platforms, labs and analysis methods.
Henrik Bengtsson, Amrita Ray, Paul T. Spellman, and Terence P. Speed Bioinformatics 25(7):861-867 (2009)
to dblp by dblp on Oct 4, 2009, 12:00 AM
URL | BibTeX
The depository firm and industry
Lewis J. Spellman Academic Press, New York, NY u.a., (1982)
to imported by fbw_hannover on Aug 21, 2009, 10:31 AM
URL | BibTeX
Sparse combinatorial inference with an application in cancer biology.
Sach Mukherjee, Steven Pelech, Richard M. Neve, Wen-Lin Kuo, Safiyyah Ziyad, Paul T. Spellman, Joe W. Gray, and Terence P. Speed Bioinformatics 25(2):265-271 (2009)
to dblp by dblp on Jun 22, 2009, 12:00 AM
URL | BibTeX
The Functional Genomics Experiment model FuGE: an extensible framework for standards in functional genomics
Andrew R. Jones, Michael Miller, Ruedi Aebersold, Rolf Apweiler, Catherine A. Ball, Alvis Brazma, James Degreef, Nigel Hardy, Henning Hermjakob, Simon J. Hubbard, Peter Hussey, Mark Igra, Helen Jenkins, Randall K. Julian, Kent Laursen, Stephen G. Oliver, Norman W. Paton, Susanna-Assunta Sansone, Ugis Sarkans, Christian J. Stoeckert, Chris F. Taylor, Patricia L. Whetzel, Joseph A. White, Paul Spellman, and Angel Pizarro Nat Biotech 25(10):1127--1133 (October 2007)
to bioinformatics, data-integration, data-standards, fuge, xml by earthfare on May 19, 2009, 6:00 PM
URL | DOI | BibTeX
Authoring Tool Accessibility Guidelines 2.0
Jutta Treviranus, Jan Richards, and Jeanne Spellman World Wide Web Consortium, Working Draft WD-ATAG20-20081124, (November 2008)
to imported by dret on Jan 14, 2009, 12:43 AM
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