@inproceedings{conf/chinz/HussainB11,
  added-at = {2012-02-02T00:00:00.000+0100},
  author = {Hussain, Norlaila and de Bruijn, Oscar},
  biburl = {http://www.bibsonomy.org/bibtex/2d2a18b29f001a95411e18f105564ce65/dblp},
  booktitle = {CHINZ},
  crossref = {conf/chinz/2011},
  editor = {Cunningham, Sally Jo and Masoodian, Masood and Rogers, Bill},
  ee = {http://doi.acm.org/10.1145/2000756.2000762},
  interhash = {bc561a26cc447205198aa64b1a36030e},
  intrahash = {d2a18b29f001a95411e18f105564ce65},
  isbn = {978-1-4503-0676-8},
  keywords = {dblp},
  pages = {41-48},
  publisher = {ACM},
  title = {The effects of distinctiveness on the use of workspace and grabbing of other's documents.},
  url = {http://dblp.uni-trier.de/db/conf/chinz/chinz2011.html#HussainB11},
  year = 2011
}

@inproceedings{conf/icls/ZitterAB08,
  added-at = {2012-01-12T00:00:00.000+0100},
  author = {Zitter, Ilya and Akkerman, Sanne and Bruijn, Elly De},
  biburl = {http://www.bibsonomy.org/bibtex/2d5132113115c81ba2b865855c089a9ec/dblp},
  booktitle = {ICLS (3)},
  crossref = {conf/icls/2008-3},
  editor = {Kirschner, Paul A. and van Merriënboer, Jeroen J. G. and de Jong, Ton},
  ee = {http://dl.acm.org/citation.cfm?id=1600052},
  interhash = {de44fa731ad348ab78fa5f39bf3cea72},
  intrahash = {d5132113115c81ba2b865855c089a9ec},
  keywords = {dblp},
  pages = {420-421},
  publisher = {International Society of the Learning Sciences},
  title = {The quest for usable knowledge: the delicate balance between research, design and change.},
  url = {http://dblp.uni-trier.de/db/conf/icls/icls2008-3.html#ZitterAB08},
  year = 2008
}

@article{journals/corr/abs-0711-2155,
  added-at = {2011-12-05T00:00:00.000+0100},
  author = {Heymans, Stijn and de Bruijn, Jos and Predoiu, Livia and Feier, Cristina and Nieuwenborgh, Davy Van},
  biburl = {http://www.bibsonomy.org/bibtex/2cba3c123238ddebf8b4db176c46b4df0/dblp},
  ee = {http://arxiv.org/abs/0711.2155},
  interhash = {39efdba6e253870bb06c250de80a8152},
  intrahash = {cba3c123238ddebf8b4db176c46b4df0},
  journal = {CoRR},
  keywords = {dblp},
  title = {Guarded Hybrid Knowledge Bases},
  url = {http://dblp.uni-trier.de/db/journals/corr/corr0711.html#abs-0711-2155},
  volume = {abs/0711.2155},
  year = 2007
}

@article{journals/corr/abs-0811-0359,
  added-at = {2011-12-05T00:00:00.000+0100},
  author = {de Bruijn, Jos and Eiter, Thomas and Polleres, Axel and Tompits, Hans},
  biburl = {http://www.bibsonomy.org/bibtex/215a34844d750d64591046cdb7a78f810/dblp},
  ee = {http://arxiv.org/abs/0811.0359},
  interhash = {654a6468b1a7e4cbfa537ee7743d3f3b},
  intrahash = {15a34844d750d64591046cdb7a78f810},
  journal = {CoRR},
  keywords = {dblp},
  title = {Embedding Non-Ground Logic Programs into Autoepistemic Logic for Knowledge Base Combination},
  url = {http://dblp.uni-trier.de/db/journals/corr/corr0811.html#abs-0811-0359},
  volume = {abs/0811.0359},
  year = 2008
}

@article{journals/db/VreedeB99,
  added-at = {2011-12-05T00:00:00.000+0100},
  author = {de Vreede, Gert-Jan and de Bruijn, Hans},
  biburl = {http://www.bibsonomy.org/bibtex/23d0e31fbafaac763c3e843d5ee6a40ab/dblp},
  cdrom = {DataBase/30-3/P111.pdf},
  ee = {http://doi.acm.org/10.1145/344241.344248},
  interhash = {c1b2b09c66978b3a14b696f859bb9d47},
  intrahash = {3d0e31fbafaac763c3e843d5ee6a40ab},
  journal = {DATA BASE},
  keywords = {dblp},
  number = {3&4},
  pages = {111-130},
  title = {Exploring the Boundaries of Successful GSS Application: Supporting Inter-Organizational Policy Networks.},
  url = {http://dblp.uni-trier.de/db/journals/db/db30.html#VreedeB99},
  volume = 30,
  year = 1999
}

@article{Roman2005,
  added-at = {2011-11-07T22:20:33.000+0100},
  address = {Amsterdam, The Netherlands},
  author = {Roman, D. and Keller, U. and Lausen, H. and De Bruijn, J. and Lara, R. and Stollberg, M. and Polleres, A. and Feier, C. and Bussler, C. and Fensel, D.},
  biburl = {http://www.bibsonomy.org/bibtex/2230cffee488fc374a774f9597907c3ed/reynares.e},
  interhash = {bae201638da0a4cfb8639c0b2a930ca6},
  intrahash = {230cffee488fc374a774f9597907c3ed},
  journal = {Applied Ontology},
  keywords = {ontology software_engineering},
  number = 1,
  pages = {77--106},
  publisher = {IOS Press},
  title = {Web Service Modeling Ontology},
  volume = 1,
  year = 2005
}

@article{journals/software/ThewSPBMVB09,
  added-at = {2011-11-07T00:00:00.000+0100},
  author = {Thew, Sarah and Sutcliffe, Alistair G. and Procter, Rob and de Bruijn, Oscar and McNaught, John and Venters, Colin C. and Buchan, Iain E.},
  biburl = {http://www.bibsonomy.org/bibtex/24687c30606ffc8499c865c6c6082c60f/dblp},
  ee = {http://doi.ieeecomputersociety.org/10.1109/MS.2009.19},
  interhash = {31843253b7ba758d2225858574e95f30},
  intrahash = {4687c30606ffc8499c865c6c6082c60f},
  journal = {IEEE Software},
  keywords = {dblp},
  number = 1,
  pages = {80-87},
  title = {Requirements Engineering for E-science: Experiences in Epidemiology.},
  url = {http://dblp.uni-trier.de/db/journals/software/software26.html#ThewSPBMVB09},
  volume = 26,
  year = 2009
}

@article{Mendes2002,
  __markedentry = {[phpts:6]},
  added-at = {2011-11-04T13:47:04.000+0100},
  author = {Mendes, S. C. and Tibbe, J. M. and Veenhof, M. and Bakker, K. and Both, S. and Platenburg, P. P. and Oner, F. C. and De Bruijn, J. D. and Van Blitterswijk, C. A.},
  biburl = {http://www.bibsonomy.org/bibtex/24ca10486d8b7d987780b8d79e42c0ad4/pawelsikorski},
  interhash = {8b92a145d4dfdbcd854fe959dedf935a},
  intrahash = {4ca10486d8b7d987780b8d79e42c0ad4},
  j9 = {TISSUE ENG},
  ji = {Tissue Eng.},
  journal = {Tissue Engineering},
  keywords = {imported},
  month = dec,
  number = 6,
  owner = {phpts},
  pages = {911--920},
  sn = {1076-3279},
  title = {Bone tissue-engineered implants using human bone marrow stromal cells:
	Effect of culture conditions and donor age},
  ut = {ISI:000179576400002},
  volume = 8,
  year = 2002
}

@inproceedings{conf/sosp/SirerBRSWWS11,
  added-at = {2011-10-25T00:00:00.000+0200},
  author = {Sirer, Emin Gün and de Bruijn, Willem and Reynolds, Patrick and Shieh, Alan and Walsh, Kevin and Williams, Dan and Schneider, Fred B.},
  biburl = {http://www.bibsonomy.org/bibtex/256d1655ebdf9375c58c92dd38ddaed00/dblp},
  booktitle = {SOSP},
  crossref = {conf/sosp/2011},
  editor = {Wobber, Ted and Druschel, Peter},
  ee = {http://doi.acm.org/10.1145/2043556.2043580},
  interhash = {416b3d7922caccb4e8d0bb28aed499ec},
  intrahash = {56d1655ebdf9375c58c92dd38ddaed00},
  isbn = {978-1-4503-0977-6},
  keywords = {dblp},
  pages = {249-264},
  publisher = {ACM},
  title = {Logical attestation: an authorization architecture for trustworthy computing.},
  url = {http://dblp.uni-trier.de/db/conf/sosp/sosp2011.html#SirerBRSWWS11},
  year = 2011
}

@article{journals/bmcbi/DonaldsonMBWLTZBBMPH03,
  added-at = {2011-10-14T00:00:00.000+0200},
  author = {Donaldson, Ian M. and Martin, Joel D. and de Bruijn, Berry and Wolting, Cheryl and Lay, Vicki and Tuekam, Brigitte and Zhang, Shudong and Baskin, Berivan and Bader, Gary D. and Michalickova, Katerina and Pawson, Tony and Hogue, Christopher W. V.},
  biburl = {http://www.bibsonomy.org/bibtex/27250f45f74d52e57be5ad039c2b2a001/dblp},
  ee = {http://dx.doi.org/10.1186/1471-2105-4-11},
  interhash = {e4abdd279aefbcd397264b49f3cc14a4},
  intrahash = {7250f45f74d52e57be5ad039c2b2a001},
  journal = {BMC Bioinformatics},
  keywords = {dblp},
  pages = 11,
  title = {PreBIND and Textomy - mining the biomedical literature for protein-protein interactions using a support vector machine.},
  url = {http://dblp.uni-trier.de/db/journals/bmcbi/bmcbi4.html#DonaldsonMBWLTZBBMPH03},
  volume = 4,
  year = 2003
}

@article{journals/ao/RomanKLBLSPFBF05,
  added-at = {2011-09-09T00:00:00.000+0200},
  author = {Roman, Dumitru and Keller, Uwe and Lausen, Holger and de Bruijn, Jos and Lara, Rubén and Stollberg, Michael and Polleres, Axel and Feier, Cristina and Bussler, Christoph and Fensel, Dieter},
  biburl = {http://www.bibsonomy.org/bibtex/29443a5e17a12e1b91911356c94e77294/dblp},
  ee = {http://iospress.metapress.com/content/dccb867p347xxebx/},
  interhash = {bae201638da0a4cfb8639c0b2a930ca6},
  intrahash = {9443a5e17a12e1b91911356c94e77294},
  journal = {Applied Ontology},
  keywords = {dblp},
  number = 1,
  pages = {77-106},
  title = {Web Service Modeling Ontology.},
  url = {http://dblp.uni-trier.de/db/journals/ao/ao1.html#RomanKLBLSPFBF05},
  volume = 1,
  year = 2005
}

@article{journals/tcs/Bruijn84,
  added-at = {2011-09-07T00:00:00.000+0200},
  author = {de Bruijn, N. G.},
  biburl = {http://www.bibsonomy.org/bibtex/2bb872109f8917d3c26ba83fc5d3b6b91/dblp},
  ee = {http://dx.doi.org/10.1016/0304-3975(84)90048-3},
  interhash = {e54c05527a076e93af002fd1702650e4},
  intrahash = {bb872109f8917d3c26ba83fc5d3b6b91},
  journal = {Theor. Comput. Sci.},
  keywords = {dblp},
  pages = {309-319},
  title = {Some Machines Defined bu Directed Graphs.},
  url = {http://dblp.uni-trier.de/db/journals/tcs/tcs32.html#Bruijn84},
  volume = 32,
  year = 1984
}

@article{journals/jamia/BruijnCKMZ11,
  added-at = {2011-08-29T00:00:00.000+0200},
  author = {de Bruijn, Berry and Cherry, Colin and Kiritchenko, Svetlana and Martin, Joel D. and Zhu, Xiaodan},
  biburl = {http://www.bibsonomy.org/bibtex/2114b46862abf46edf77eb3cc4d723a3a/dblp},
  ee = {http://dx.doi.org/10.1136/amiajnl-2011-000150},
  interhash = {8f64daf4ecade44ca70ba3da0ba7daa1},
  intrahash = {114b46862abf46edf77eb3cc4d723a3a},
  journal = {JAMIA},
  keywords = {dblp},
  number = 5,
  pages = {557-562},
  title = {Machine-learned solutions for three stages of clinical information extraction: the state of the art at i2b2 2010.},
  url = {http://dblp.uni-trier.de/db/journals/jamia/jamia18.html#BruijnCKMZ11},
  volume = 18,
  year = 2011
}

@webpage{Bruijn2010,
  added-at = {2011-08-19T12:45:25.000+0200},
  author = {de Bruijn, Jos},
  biburl = {http://www.bibsonomy.org/bibtex/222107b526edde681c240b78a2391e44b/zazi},
  interhash = {d8c9d591333b7f0a58259977ed581417},
  intrahash = {22107b526edde681c240b78a2391e44b},
  keywords = {imported},
  lastchecked = {08-01-2011},
  month = {June},
  owner = {zazi},
  title = {{RIF RDF and OWL Compatibility}},
  url = {http://www.w3.org/TR/rif-rdf-owl/},
  year = 2010
}

@inproceedings{Kifer2005,
  added-at = {2011-08-09T16:33:51.000+0200},
  author = {Kifer, Michael and de Bruijn, Jos and Boley, Harold and Fensel, Dieter},
  bibsource = {DBLP, http://dblp.uni-trier.de},
  biburl = {http://www.bibsonomy.org/bibtex/281ec4a806f457e40fcafa02523526b96/reynares.e},
  booktitle = {RuleML},
  editor = {Adi, Asaf and Stoutenburg, Suzette and Tabet, Said},
  ee = {http://dx.doi.org/10.1007/11580072_3},
  interhash = {1c636d0840c053ae62acdcf269ca8fdf},
  intrahash = {81ec4a806f457e40fcafa02523526b96},
  isbn = {3-540-29922-X},
  keywords = {imported},
  pages = {17-29},
  publisher = {Springer},
  series = {Lecture Notes in Computer Science},
  tags = {architecture, TOREAD},
  title = {A Realistic Architecture for the Semantic Web},
  volume = 3791,
  year = 2005
}

@article{journals/jct/Bruijn72,
  added-at = {2011-08-03T00:00:00.000+0200},
  author = {de Bruijn, N. G.},
  biburl = {http://www.bibsonomy.org/bibtex/2d10e2621cffb310f81006f4b28a9458c/dblp},
  ee = {http://dx.doi.org/10.1016/0097-3165(72)90081-7},
  interhash = {1084956e6c4351806d5cb511195a8d21},
  intrahash = {d10e2621cffb310f81006f4b28a9458c},
  journal = {J. Comb. Theory, Ser. A},
  keywords = {dblp},
  number = 1,
  pages = {14-20},
  title = {Enumeration of Mapping Patterns.},
  url = {http://dblp.uni-trier.de/db/journals/jct/jcta12.html#Bruijn72},
  volume = 12,
  year = 1972
}

@article{ExaCT.clinical.parameters.2010,
  abstract = {{BACKGROUND:Clinical trials are one of the most important sources of evidence for guiding evidence-based practice and the design of new trials. However, most of this information is available only in free text - e.g., in journal publications - which is labour intensive to process for systematic reviews, meta-analyses, and other evidence synthesis studies. This paper presents an automatic information extraction system, called ExaCT, that assists users with locating and extracting key trial characteristics (e.g., eligibility criteria, sample size, drug dosage, primary outcomes) from full-text journal articles reporting on randomized controlled trials (RCTs).METHODS:ExaCT consists of two parts: an information extraction (IE) engine that searches the article for text fragments that best describe the trial characteristics, and a web browser-based user interface that allows human reviewers to assess and modify the suggested selections. The IE engine uses a statistical text classifier to locate those sentences that have the highest probability of describing a trial characteristic. Then, the IE engine's second stage applies simple rules to these sentences to extract text fragments containing the target answer. The same approach is used for all 21 trial characteristics selected for this study.RESULTS:We evaluated ExaCT using 50 previously unseen articles describing RCTs. The text classifier (first stage) was able to recover 88\% of relevant sentences among its top five candidates (top5 recall) with the topmost candidate being relevant in 80\% of cases (top1 precision). Precision and recall of the extraction rules (second stage) were 93\% and 91\%, respectively. Together, the two stages of the extraction engine were able to provide (partially) correct solutions in 992 out of 1050 test tasks (94\%), with a majority of these (696) representing fully correct and complete answers.CONCLUSIONS:Our experiments confirmed the applicability and efficacy of ExaCT. Furthermore, they demonstrated that combining a statistical method with 'weak' extraction rules can identify a variety of study characteristics. The system is flexible and can be extended to handle other characteristics and document types (e.g., study protocols).}},
  added-at = {2011-07-20T21:50:33.000+0200},
  author = {Kiritchenko, Svetlana and de Bruijn, Berry and Carini, Simona and Martin, Joel and Sim, Ida},
  biburl = {http://www.bibsonomy.org/bibtex/2f677c3185cf039caf8bcf10951a013db/huiyangsfsu},
  citeulike-article-id = {7917242},
  citeulike-linkout-0 = {http://dx.doi.org/10.1186/1472-6947-10-56},
  citeulike-linkout-1 = {http://view.ncbi.nlm.nih.gov/pubmed/20920176},
  citeulike-linkout-2 = {http://www.hubmed.org/display.cgi?uids=20920176},
  day = 28,
  doi = {10.1186/1472-6947-10-56},
  interhash = {0ff5bd9e638311067f24de32398f0968},
  intrahash = {f677c3185cf039caf8bcf10951a013db},
  issn = {1472-6947},
  journal = {BMC Medical Informatics and Decision Making},
  keywords = {CAT CAT-Parameter},
  month = sep,
  number = 1,
  pages = {56+},
  pmid = {20920176},
  posted-at = {2011-03-31 16:43:18},
  priority = {2},
  title = {{ExaCT: automatic extraction of clinical trial characteristics from journal publications}},
  url = {http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2954855/?tool=pubmed},
  volume = 10,
  year = 2010
}

@inproceedings{conf/esws/BruijnL04,
  added-at = {2011-07-07T00:00:00.000+0200},
  author = {de Bruijn, Jos and Lausen, Holger},
  biburl = {http://www.bibsonomy.org/bibtex/2794ecbd2843ec1b3eea9f83d50800c7d/dblp},
  booktitle = {ESWS},
  crossref = {conf/esws/2004},
  editor = {Bussler, Christoph and Davies, John and Fensel, Dieter and Studer, Rudi},
  ee = {http://dx.doi.org/10.1007/978-3-540-25956-5_8},
  interhash = {e3860caa97ede51457fc2967fee85a05},
  intrahash = {794ecbd2843ec1b3eea9f83d50800c7d},
  isbn = {3-540-21999-4},
  keywords = {dblp},
  pages = {107-120},
  publisher = {Springer},
  series = {Lecture Notes in Computer Science},
  title = {Active Ontologies for Data Source Queries.},
  url = {http://dblp.uni-trier.de/db/conf/esws/esws2004.html#BruijnL04},
  volume = 3053,
  year = 2004
}

@article{journals/iandc/Bruijn91,
  added-at = {2011-07-06T00:00:00.000+0200},
  author = {de Bruijn, N. G.},
  biburl = {http://www.bibsonomy.org/bibtex/2ecbc99746d41d372d2cbce77f120c73a/dblp},
  ee = {http://dx.doi.org/10.1016/0890-5401(91)90066-B},
  interhash = {198575c02d5869a2c6a3bbb2264a74c9},
  intrahash = {ecbc99746d41d372d2cbce77f120c73a},
  journal = {Inf. Comput.},
  keywords = {dblp},
  month = {April},
  number = 2,
  pages = {189-204},
  title = {Telescopic Mappings in Typed Lambda Calculus},
  url = {http://dblp.uni-trier.de/db/journals/iandc/iandc91.html#Bruijn91},
  volume = 91,
  year = 1991
}

@article{journals/artmed/LucasBSH00,
  added-at = {2011-07-04T00:00:00.000+0200},
  author = {Lucas, Peter J. F. and de Bruijn, Nicolette and Schurink, Karin and Hoepelman, Andy},
  biburl = {http://www.bibsonomy.org/bibtex/2beb51864b85ab9fe88354bebeb23e5a4/dblp},
  ee = {http://dx.doi.org/10.1016/S0933-3657(00)00048-8},
  interhash = {57374367958d7cb8f50f5125738be286},
  intrahash = {beb51864b85ab9fe88354bebeb23e5a4},
  journal = {Artificial Intelligence in Medicine},
  keywords = {dblp},
  number = 3,
  pages = {251-279},
  title = {A probabilistic and decision-theoretic approach to the management of infectious disease at the ICU.},
  url = {http://dblp.uni-trier.de/db/journals/artmed/artmed19.html#LucasBSH00},
  volume = 19,
  year = 2000
}