@inproceedings{conf/bibm/GordonKWS07, title = {Using a Novel Data Transformation Technique to Provide the EMBOSS Software Suite as Semantic Web Services.}, author = {Paul M. K. Gordon and Edward Kawas and Mark Wilkinson and Christoph W. Sensen}, booktitle = {BIBM}, crossref = {conf/bibm/2007}, pages = {117-124}, publisher = {IEEE Computer Society}, url = {http://dblp.uni-trier.de/db/conf/bibm/bibm2007.html#GordonKWS07}, year = {2007}, biburl = {http://www.bibsonomy.org/bibtex/22477d9839ce3d87eea09d5eba8db2aa9/dblp}, description = {dblp}, ee = {http://doi.ieeecomputersociety.org/10.1109/BIBM.2007.70}, date = {2008-04-23}, keywords = {dblp } } @article{journals/bioinformatics/SongKGWT07, title = {DataBiNS: a BioMoby-based data-mining workflow for biological pathways and non-synonymous SNPs.}, author = {Young C. Song and Edward Kawas and Benjamin M. Good and Mark D. Wilkinson and Scott J. Tebbutt}, journal = {Bioinformatics}, number = {6}, pages = {780-782}, url = {http://dblp.uni-trier.de/db/journals/bioinformatics/bioinformatics23.html#SongKGWT07}, volume = {23}, year = {2007}, biburl = {http://www.bibsonomy.org/bibtex/2b6a7e66593c942b9623f06014c09700f/dblp}, description = {dblp}, ee = {http://dx.doi.org/10.1093/bioinformatics/btl648}, date = {2007-05-14}, keywords = {dblp } } @article{Song2007, title = {DataBiNS: a BioMoby-based data-mining workflow for biological pathways and non-synonymous SNPs}, author = {Young C. Song and Edward Kawas and Ben M. Good and Mark D. Wilkinson and Scott J. Tebbutt}, day = {24}, journal = {Bioinformatics}, month = {Jan}, number = {6}, pages = {780--782}, url = {http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=retrieve&db=pubmed&list_uids=17237074&dopt=Abstract}, volume = {23}, year = {2007}, biburl = {http://www.bibsonomy.org/bibtex/2371f685ae581b27d05c65062f9905ee6/p_ansell}, description = {Bioinformatics Workflow Systems}, abstract = {Summary: DataBiNS is a custom-designed BioMoby Web Service workflow that integrates non-synonymous coding single nucleotide polymorphisms (nsSNPs) data with structure/function and pathway data for the relevant protein. A KEGG Pathway Identifier representing a specific human biological pathway initializes the DataBiNS workflow. The workflow retrieves a list of publications, gene ontology annotations and nsSNP information for each gene involved in the biological pathway. Manual inspection of output data from several trial runs confirms that all expected information is appropriately retrieved by the workflow services. The use of an automated BioMoby workflow, rather than manual surfing', to retrieve the necessary data, significantly reduces the effort required for functional interpretation of SNP data, and thus encourages more speculative investigation. Moreover, the modular nature of the individual BioMoby Services enables fine-grained reusing of each service in other workflows, thus reducing the effort required to achieve similar investigations in the future. Availability: The workflow is freely available as a Taverna SCUFL XML document at the iCAPTURE Centre web site, http://www.mrl.ubc.ca/who/who_bios_scott_tebbutt.shtml. Contact: stebbutt@mrl.ubc.ca Supplementary information: Additional information, including test result data, is available from the iCAPTURE Centre web site (see above).}, doi = {10.1093/bioinformatics/btl648}, owner = {peter}, pdf = {Song2007.pdf}, timestamp = {2007.05.04 12:59}, keywords = {bioinformatics biomoby services taverna web } } @article{Kawas2006, title = {Bio{M}oby extensions to the Taverna workflow management and enactment software}, author = {Edward Kawas and Martin Senger and Mark D Wilkinson}, journal = {BMC Bioinformatics}, number = {523}, volume = {7}, year = {2006}, biburl = {http://www.bibsonomy.org/bibtex/25838c046760d895ef735d6cafbcd5a74/p_ansell}, description = {Bioinformatics Workflow Systems}, doi = {10.1186/1471-2105-7-523}, owner = {ansellp}, pdf = {Kawas2006-BioMobyExtensionsToTheTavernaWorkflowManagementAndEnactmentSoftware.pdf}, timestamp = {2007.04.04}, keywords = {imported } } @article{Song2007, title = {DataBiNS: Data Mining Tool for Biological Pathways and Non-Synonymous SNPs.}, author = {Young Song and Edward Kawas and Ben Good and Mark Wilkinson and Scott Tebbutt}, day = {24}, journal = {Bioinformatics}, month = {Jan}, note = {10.1093/bioinformatics/btl648}, url = {http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=retrieve&db=pubmed&list_uids=17237074&dopt=Abstract}, year = {2007}, biburl = {http://www.bibsonomy.org/bibtex/214e1f44a35760b3578636266d391a26d/bgood}, keywords = {"web bioinformatics biomoby services" taverna } } @inproceedings{conf/eurocode/LeeuwinBK90, title = {Chernoff bound of trellis coded modulation over correlated Rayleigh channel.}, author = {K. Leeuwin and J. C. Belfiore and Ghassan Kawas Kaleh}, booktitle = {EUROCODE}, crossref = {conf/eurocode/1990}, editor = {Gérard D. Cohen and Pascale Charpin}, pages = {364-376}, publisher = {Springer}, series = {Lecture Notes in Computer Science}, url = {http://dblp.uni-trier.de/db/conf/eurocode/eurocode1990.html#LeeuwinBK90}, volume = {514}, year = {1990}, biburl = {http://www.bibsonomy.org/bibtex/247885b128ca3d81550137593344ddd8e/dblp}, description = {dblp}, isbn = {3-540-54303-1}, date = {2002-01-23}, keywords = {dblp } } @article{journals/jsac/Kaleh95, title = {Channel Equalization for Block Transmission Systems.}, author = {Ghassan Kawas Kaleh}, journal = {IEEE Journal on Selected Areas in Communications}, number = {1}, pages = {110-121}, url = {http://dblp.uni-trier.de/db/journals/jsac/jsac13.html#Kaleh95}, volume = {13}, year = {1995}, biburl = {http://www.bibsonomy.org/bibtex/2829380fe8910e5232956c6bebdcb08c8/dblp}, description = {dblp}, date = {2002-01-03}, keywords = {dblp } }