%0 Journal Article %1 MariaKrestyaninova10152009 %A Krestyaninova, Maria %A Zarins, Andris %A Viksna, Juris %A Kurbatova, Natalja %A Rucevskis, Peteris %A Neogi, Sudeshna Guha %A Gostev, Mike %A Perheentupa, Teemu %A Knuuttila, Juha %A Barrett, Amy %A Lappalainen, Ilkka %A Rung, Johan %A Podnieks, Karlis %A Sarkans, Ugis %A McCarthy, Mark I %A Brazma, Alvis %D 2009 %J Bioinformatics %K opensource proj:0915 software web %N 20 %P 2768-2769 %R 10.1093/bioinformatics/btp420 %T A System for Information Management in BioMedical Studies--SIMBioMS %U http://bioinformatics.oxfordjournals.org/cgi/content/abstract/25/20/2768 %V 25 %X Summary: SIMBioMS is a web-based open source software system for managing data and information in biomedical studies. It provides a solution for the collection, storage, management and retrieval of information about research subjects and biomedical samples, as well as experimental data obtained using a range of high-throughput technologies, including gene expression, genotyping, proteomics and metabonomics. The system can easily be customized and has proven to be successful in several large-scale multi-site collaborative projects. It is compatible with emerging functional genomics data standards and provides data import and export in accepted standard formats. Protocols for transferring data to durable archives at the European Bioinformatics Institute have been implemented. Availability: The source code, documentation and initialization scripts are available at http://simbioms.org. Contact: support@simbioms.org; mariak@ebi.ac.uk

@article{MariaKrestyaninova10152009, abstract = {Summary: SIMBioMS is a web-based open source software system for managing data and information in biomedical studies. It provides a solution for the collection, storage, management and retrieval of information about research subjects and biomedical samples, as well as experimental data obtained using a range of high-throughput technologies, including gene expression, genotyping, proteomics and metabonomics. The system can easily be customized and has proven to be successful in several large-scale multi-site collaborative projects. It is compatible with emerging functional genomics data standards and provides data import and export in accepted standard formats. Protocols for transferring data to durable archives at the European Bioinformatics Institute have been implemented. Availability: The source code, documentation and initialization scripts are available at http://simbioms.org. Contact: support@simbioms.org; mariak@ebi.ac.uk }, added-at = {2009-10-19T22:09:24.000+0200}, author = {Krestyaninova, Maria and Zarins, Andris and Viksna, Juris and Kurbatova, Natalja and Rucevskis, Peteris and Neogi, Sudeshna Guha and Gostev, Mike and Perheentupa, Teemu and Knuuttila, Juha and Barrett, Amy and Lappalainen, Ilkka and Rung, Johan and Podnieks, Karlis and Sarkans, Ugis and McCarthy, Mark I and Brazma, Alvis}, biburl = {https://www.bibsonomy.org/bibtex/2a828965e09ecb092be97eb3576b103ed/wnpxrz}, description = {A System for Information Management in BioMedical Studies--SIMBioMS -- Krestyaninova et al. 25 (20): 2768 -- Bioinformatics}, doi = {10.1093/bioinformatics/btp420}, eprint = {http://bioinformatics.oxfordjournals.org/cgi/reprint/25/20/2768.pdf}, interhash = {3256a55b933130a6a886288b031e30c4}, intrahash = {a828965e09ecb092be97eb3576b103ed}, journal = {Bioinformatics}, keywords = {opensource proj:0915 software web}, number = 20, pages = {2768-2769}, timestamp = {2009-10-19T22:09:24.000+0200}, title = {{A System for Information Management in BioMedical Studies--SIMBioMS}}, url = {http://bioinformatics.oxfordjournals.org/cgi/content/abstract/25/20/2768}, volume = 25, year = 2009 }