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Gordon&lt;/a&gt;, &lt;a href=&#034;/author/Thies&#034;&gt;William Thies&lt;/a&gt;, &lt;a href=&#034;/author/Karczmarek&#034;&gt;Michal Karczmarek&lt;/a&gt;, &lt;a href=&#034;/author/Lin&#034;&gt;Jasper Lin&lt;/a&gt;, &lt;a href=&#034;/author/Meli&#034;&gt;Ali S. Meli&lt;/a&gt;, &lt;a href=&#034;/author/Lamb&#034;&gt;Andrew A. Lamb&lt;/a&gt;, &lt;a href=&#034;/author/Leger&#034;&gt;Chris Leger&lt;/a&gt;, &lt;a href=&#034;/author/Wong&#034;&gt;Jeremy Wong&lt;/a&gt;, &lt;a href=&#034;/author/Hoffmann&#034;&gt;Henry Hoffmann&lt;/a&gt;, &lt;a href=&#034;/author/Maze&#034;&gt;David Maze&lt;/a&gt;,  and &lt;a href=&#034;/author/Amarasinghe&#034;&gt;Saman P. Amarasinghe&lt;/a&gt; &lt;/span&gt;&lt;em&gt;ASPLOS, &lt;/em&gt;&lt;em&gt;page 291-303. &lt;/em&gt;&lt;em&gt;ACM Press, &lt;/em&gt;(&lt;em&gt;2002&lt;/em&gt;)</content:encoded><taxo:topics><rdf:Bag><rdf:li rdf:resource="http://www.bibsonomy.org/tag/dblp"/></rdf:Bag></taxo:topics><burst:publication><rdf:Description rdf:about="http://www.bibsonomy.org/bibtex/259f541a80e131bcdd775735302e2da0b/dblp"><owl:sameAs rdf:resource="http://www.bibsonomy.org/uri/bibtex/259f541a80e131bcdd775735302e2da0b/dblp"/><rdf:type rdf:resource="http://swrc.ontoware.org/ontology#InProceedings"/><owl:sameAs rdf:resource="http://dblp.uni-trier.de/db/conf/asplos/asplos2002.html#GordonTKLMLLWHMA02"/><swrc:date>Fri Dec 23 00:00:00 CET 2011</swrc:date><swrc:booktitle>ASPLOS</swrc:booktitle><swrc:crossref>conf/asplos/2002</swrc:crossref><swrc:pages>291-303</swrc:pages><swrc:publisher><swrc:Organization swrc:name="ACM Press"/></swrc:publisher><swrc:title>A stream compiler for communication-exposed architectures.</swrc:title><swrc:year>2002</swrc:year><swrc:keywords>dblp </swrc:keywords><swrc:hasExtraField><swrc:Field swrc:value="http://doi.acm.org/10.1145/605397.605428" swrc:key="ee"/></swrc:hasExtraField><swrc:hasExtraField><swrc:Field swrc:value="1-58113-574-2" swrc:key="isbn"/></swrc:hasExtraField><swrc:author><rdf:Seq><rdf:_1><swrc:Person swrc:name="Michael I. 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          AVHRR HRPT data</title><link>http://www.bibsonomy.org/bibtex/2a1eb9aaea480a4fc85c3a2003d32759f/anamarg</link><dc:creator>anamarg</dc:creator><dc:date>2010-02-23T20:59:31+01:00</dc:date><dc:subject>imported </dc:subject><content:encoded>&lt;span class=&#034;authorEditorList&#034;&gt;&lt;a href=&#034;/author/Moreno&#034;&gt;J. F. Moreno&lt;/a&gt;,  and &lt;a href=&#034;/author/Meliá&#034;&gt;J. Meliá&lt;/a&gt; &lt;/span&gt;&lt;em&gt;I.E.E.E. Transactions on Geoscience and Remote Sensing&lt;/em&gt;  (&lt;em&gt;1993&lt;/em&gt;)</content:encoded><taxo:topics><rdf:Bag><rdf:li rdf:resource="http://www.bibsonomy.org/tag/imported"/></rdf:Bag></taxo:topics><burst:publication><rdf:Description rdf:about="http://www.bibsonomy.org/bibtex/2a1eb9aaea480a4fc85c3a2003d32759f/anamarg"><owl:sameAs rdf:resource="http://www.bibsonomy.org/uri/bibtex/2a1eb9aaea480a4fc85c3a2003d32759f/anamarg"/><rdf:type rdf:resource="http://swrc.ontoware.org/ontology#Article"/><swrc:date>Tue Feb 23 20:59:31 CET 2010</swrc:date><swrc:journal>I.E.E.E. Transactions on Geoscience and Remote Sensing</swrc:journal><swrc:pages>204--226</swrc:pages><swrc:title>A method for accurate geometric correction of {NOAA}
          {AVHRR} {HRPT} data</swrc:title><swrc:volume>31</swrc:volume><swrc:year>1993</swrc:year><swrc:keywords>imported </swrc:keywords><swrc:hasExtraField><swrc:Field swrc:value="badenas_etal_1997" swrc:key="refer_in"/></swrc:hasExtraField><swrc:author><rdf:Seq><rdf:_1><swrc:Person swrc:name="J. F. Moreno"/></rdf:_1><rdf:_2><swrc:Person swrc:name="J. Meli\&#039;{a}"/></rdf:_2></rdf:Seq></swrc:author></rdf:Description></burst:publication></item><item rdf:about="http://www.bibsonomy.org/bibtex/24cf4d5345264bbdaadc1a0d714c06f84/huiyangsfsu"><title>Investigating the mechanism of peptide aggregation: Insights from mixed
   Monte Carlo-Molecular dynamics simulations</title><link>http://www.bibsonomy.org/bibtex/24cf4d5345264bbdaadc1a0d714c06f84/huiyangsfsu</link><dc:creator>huiyangsfsu</dc:creator><dc:date>2009-01-11T01:42:11+01:00</dc:date><dc:subject>formation hierarchical </dc:subject><content:encoded>&lt;span class=&#034;authorEditorList&#034;&gt;&lt;a href=&#034;/author/Meli&#034;&gt;Massimiliano Meli&lt;/a&gt;, &lt;a href=&#034;/author/Morra&#034;&gt;Giulia Morra&lt;/a&gt;,  and &lt;a href=&#034;/author/Colombo&#034;&gt;Giorgio Colombo&lt;/a&gt; &lt;/span&gt;&lt;em&gt;BIOPHYSICAL JOURNAL&lt;/em&gt; &lt;em&gt;94(11):4414-4426&lt;/em&gt; (&lt;em&gt;June 2008&lt;/em&gt;)</content:encoded><taxo:topics><rdf:Bag><rdf:li rdf:resource="http://www.bibsonomy.org/tag/formation"/><rdf:li rdf:resource="http://www.bibsonomy.org/tag/hierarchical"/></rdf:Bag></taxo:topics><burst:publication><rdf:Description rdf:about="http://www.bibsonomy.org/bibtex/24cf4d5345264bbdaadc1a0d714c06f84/huiyangsfsu"><owl:sameAs rdf:resource="http://www.bibsonomy.org/uri/bibtex/24cf4d5345264bbdaadc1a0d714c06f84/huiyangsfsu"/><rdf:type rdf:resource="http://swrc.ontoware.org/ontology#Article"/><swrc:date>Sun Jan 11 01:42:11 CET 2009</swrc:date><swrc:address>{9650 ROCKVILLE PIKE, BETHESDA, MD 20814-3998 USA}</swrc:address><swrc:journal>{BIOPHYSICAL JOURNAL}</swrc:journal><swrc:month>{JUN 1}</swrc:month><swrc:number>{11}</swrc:number><swrc:pages>{4414-4426}</swrc:pages><swrc:publisher><swrc:Organization swrc:name="{BIOPHYSICAL SOC}"/></swrc:publisher><swrc:title>{Investigating the mechanism of peptide aggregation: Insights from mixed
   Monte Carlo-Molecular dynamics simulations}</swrc:title><swrc:type>{Article}</swrc:type><swrc:volume>{94}</swrc:volume><swrc:year>{2008}</swrc:year><swrc:keywords>formation hierarchical </swrc:keywords><swrc:abstract>{The early stages of peptide aggregation are currently not accessible by
   experimental techniques at atomic resolution. In this article, we
   address this problem through the application of a mixed simulation
   scheme in which a preliminary coarse-grained Monte Carlo analysis of
   the free-energy landscape is used to identify representative
   conformations of the aggregates and subsequent all-atom molecular
   dynamics simulations are used to analyze in detail possible pathways
   for the stabilization of oligomers. This protocol was applied to
   systems consisting of multiple copies of the model peptide GNNQQNY,
   whose detailed structures in the aggregated state have been recently
   solved in another study. The analysis of the various trajectories
   provides dynamical and structural insight into the details of
   aggregation. In particular, the simulations suggest a hierarchical
   mechanism characterized by the initial formation of stable parallel
   beta-sheet dimers and identify the formation of the polar zipper motif
   as a fundamental feature for the stabilization of initial oligomers.
   Simulation results are consistent with experimentally derived
   observations and provide an atomically detailed view of the putative
   initial stages of fibril formation.}</swrc:abstract><swrc:hasExtraField><swrc:Field swrc:value="{giorgio.colombo@icrm.cnr.it}" swrc:key="author-email"/></swrc:hasExtraField><swrc:hasExtraField><swrc:Field swrc:value="{0006-3495}" swrc:key="issn"/></swrc:hasExtraField><swrc:hasExtraField><swrc:Field swrc:value="{AMYLOID FIBRIL FORMATION; CROSS-BETA-SPINE; FOLDING SIMULATIONS; VILLIN
   HEADPIECE; ENERGY LANDSCAPE; FORMING PEPTIDE; EARLY STEPS; IN-VITRO;
   PROTEIN; OLIGOMERS}" swrc:key="keywords-plus"/></swrc:hasExtraField><swrc:hasExtraField><swrc:Field swrc:value="{301OA}" swrc:key="doc-delivery-number"/></swrc:hasExtraField><swrc:hasExtraField><swrc:Field swrc:value="{BAUMKETNER A, 2006, J MOL BIOL, V362, P567, DOI 10.1016/j.jmb.2006.07.032.
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   ZURDO J, 2001, J AM CHEM SOC, V123, P8141.}" swrc:key="cited-references"/></swrc:hasExtraField><swrc:hasExtraField><swrc:Field swrc:value="{Biophysics}" swrc:key="subject-category"/></swrc:hasExtraField><swrc:hasExtraField><swrc:Field swrc:value="{62}" swrc:key="number-of-cited-references"/></swrc:hasExtraField><swrc:hasExtraField><swrc:Field swrc:value="{Colombo, G (Reprint Author), CNR, Ist Chim \&amp; Ricoscimento Mol, Via Mario Bianco 9, I-20131 Milan, Italy.
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