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compevol
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from:stephane.guindon
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related tags
+
phylogeny
+
false_detection_rate
+
molecular_phylogeny
+
positive_selection
+
seaview
+
software
tags
imported
from:davidjamesbryant
from:alexei.drummond
myown
alexei1
from:stephane.guindon
*Phylogeny
EVOLUTION,
bayesian
Genetic
*Models
Simulation
Computer
coalescent
Molecular
Genetic;
gillespie
stochastic-logistic
translation
population-dynamics
phylogeny
Evolution,
*Models,
extinction
Protein
DNA,
Models,
Molecular;
Genetic_Code,
Analysis
ESCHERICHIA-COLI,
Analysis;
ssa
origin,
AMINO-ACIDS,
stochastic_simulation_algorithm
density-dependence
Species
Humans;
reaction_kinetics_theory
multispecies-coalescent
Specificity
LIFE,
Statistical
Phylogeny;
autocatalytic
phylodynamics
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No matching items.
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.
S. Guindon
,
JF Dufayard
,
V. Lefort
,
M. Anisimova
,
W. Hordijk
, and
O. Gascuel
.
Systematic Biology
59(3):307-321
(
2010
)
S. Guindon
,
JF Dufayard
,
V. Lefort
,
M. Anisimova
,
W. Hordijk
, and
O. Gascuel
.
Systematic Biology
59(3):307-321
(
2010
)
2 years and a month ago
by
compevol
2
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
Bayesian estimation of divergence times from large sequence alignments.
S. Guindon
.
Molecular Biology and Evolution
27(8):1768-81
(
2010
)
S. Guindon
.
Molecular Biology and Evolution
27(8):1768-81
(
2010
)
2 years and 7 months ago
by
compevol
2
from:stephane.guindon
phylogeny
from:stephane.guindon
phylogeny
(0)
URL
DOI
TeX
Bayesian estimation of divergence times from large sequence alignments.
Stephane Guindon
.
Molecular Biology and Evolution
27(8):1768-81
(
2010
)
Stephane Guindon
.
Molecular Biology and Evolution
27(8):1768-81
(
2010
)
2 years and 7 months ago
by
compevol
2
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building.
Gascuel O. Gouy M.
.
(
2009
)
Gascuel O. Gouy M.
.
(
2009
)
3 years and 3 months ago
by
compevol
1
from:stephane.guindon
phylogeny
seaview
software
from:stephane.guindon
phylogeny
seaview
software
(0)
URL
DOI
TeX
Evolution of plant MADS box transcription factors: evidence for shifts in selection associated with early angiosperm diversification and concerted gene duplications
Hongyan Shan
,
Laura Zahn
,
Stephane Guindon
,
P Kerr Wall
,
Hongzhi Kong
,
Hong Ma
,
Claude W DePamphilis
, and
Jim Leebens-Mack
.
(
2009
)
Hongyan Shan
,
Laura Zahn
,
Stephane Guindon
,
P Kerr Wall
,
Hongzhi Kong
,
Hong Ma
,
Claude W DePamphilis
, and
Jim Leebens-Mack
.
(
2009
)
3 years and 3 months ago
by
compevol
1
from:stephane.guindon
phylogeny
from:stephane.guindon
phylogeny
(0)
URL
DOI
TeX
Phylogeny.fr: robust phylogenetic analysis for the non-specialist.
A Dereeper
,
V Guignon
,
G Blanc
,
S Audic
,
S Buffet
,
F Chevenet
,
J F Dufayard
,
S Guindon
,
V Lefort
,
M Lescot
,
J M Claverie
, and
O Gascuel
.
Nucleic Acids Res.
(
July 2008
)
A Dereeper
,
V Guignon
,
G Blanc
,
S Audic
,
S Buffet
,
F Chevenet
,
J F Dufayard
,
S Guindon
,
V Lefort
,
M Lescot
,
J M Claverie
, and
O Gascuel
.
Nucleic Acids Res.
(
July 2008
)
4 years ago
by
compevol
2
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
Viral quasi-species evolution during hepatitis Be antigen seroconversion.
S. Lim
,
Y. Cheng
,
S. Guindon
,
B. Seet
,
L. Lee
,
P. Hu
,
S. Wasser
,
F. Peter
,
T. Tan
,
M. Goode
, and
A. Rodrigo
.
Gastroenterology
133(3):951-8
(
2007
)
S. Lim
,
Y. Cheng
,
S. Guindon
,
B. Seet
,
L. Lee
,
P. Hu
,
S. Wasser
,
F. Peter
,
T. Tan
,
M. Goode
, and
A. Rodrigo
.
Gastroenterology
133(3):951-8
(
2007
)
4 years ago
by
compevol
1
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
Identification of NF-kappaB responsive elements in follistatin related gene FLRG promoter.
L. Bartholin
,
S. Guindon
,
S. Martel
,
L. Corbo
, and
R. Rimokh
.
Gene
393(1-2):153-62
(
May 2007
)
L. Bartholin
,
S. Guindon
,
S. Martel
,
L. Corbo
, and
R. Rimokh
.
Gene
393(1-2):153-62
(
May 2007
)
4 years ago
by
compevol
1
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
Genomics, biogeography, and the diversification of placental mammals.
D.E. Wildman
,
M. Uddin
,
J. Opazo
,
G. Liu
,
V. Lefort
,
S. Guindon
,
O. Gascuel
,
L. Grossman
,
R. Romero
, and
M. Goodman
.
Proc Natl Acad Sci U S A
104(36):14395-400
(
September 2007
)
D.E. Wildman
,
M. Uddin
,
J. Opazo
,
G. Liu
,
V. Lefort
,
S. Guindon
,
O. Gascuel
,
L. Grossman
,
R. Romero
, and
M. Goodman
.
Proc Natl Acad Sci U S A
104(36):14395-400
(
September 2007
)
4 years ago
by
compevol
1
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
Control of the False Discovery Rate Applied to the Detection of Positively Selected Amino Acid Sites.
S. Guindon
,
M. Black
, and
A. Rodrigo
.
Molecular Biology and Evolution
23(5):919-926
(
January 2006
)
S. Guindon
,
M. Black
, and
A. Rodrigo
.
Molecular Biology and Evolution
23(5):919-926
(
January 2006
)
4 years ago
by
compevol
2
false_detection_rate
from:stephane.guindon
molecular_phylogeny
positive_selection
false_detection_rate
from:stephane.guindon
molecular_phylogeny
positive_selection
(0)
URL
DOI
TeX
PHYML Online -- a web server for fast maximum likelihood-based phylogenetic inference
S. Guindon
,
F. Lethiec
,
P. Duroux
, and
O. Gascuel
.
Nucleic Acids Research
(
2005
)
S. Guindon
,
F. Lethiec
,
P. Duroux
, and
O. Gascuel
.
Nucleic Acids Research
(
2005
)
4 years and 4 months ago
by
compevol
4
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
Modeling the site-specific variation of selection patterns along lineages
S. Guindon
,
A. Rodrigo
,
K. Dyer
, and
J. Huelsenbeck
.
Proceedings of the National Academy of Sciences of the United States of America PNAS
(
2004
)
S. Guindon
,
A. Rodrigo
,
K. Dyer
, and
J. Huelsenbeck
.
Proceedings of the National Academy of Sciences of the United States of America PNAS
(
2004
)
4 years and 4 months ago
by
compevol
2
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
Intragenomic base content variation is a potential source of biases when searching for horizontally transferred genes
S. Guindon
, and
G. Perrière
.
Molecular Biology and Evolution
(
2001
)
S. Guindon
, and
G. Perrière
.
Molecular Biology and Evolution
(
2001
)
4 years and 4 months ago
by
compevol
2
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
Efficient biased estimation of evolutionary distances when substitution rates vary across sites
S. Guindon
, and
O. Gascuel
.
Molecular Biology and Evolution
(
2002
)
S. Guindon
, and
O. Gascuel
.
Molecular Biology and Evolution
(
2002
)
4 years and 4 months ago
by
compevol
2
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
A simple, fast and accurate algorithm to estimate large phylogenies by maximum likelihood
S. Guindon
, and
O. Gascuel
.
Systematic Biology
(
2003
)
S. Guindon
, and
O. Gascuel
.
Systematic Biology
(
2003
)
4 years and 4 months ago
by
compevol
3
from:stephane.guindon
from:stephane.guindon
(0)
URL
DOI
TeX
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