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ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations.

, , , , , , , , and . Comput. Phys. Commun., 165 (1): 59-96 (2005)

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ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations., , , , , , , , and . Comput. Phys. Commun., 165 (1): 59-96 (2005)Multicanonical parallel simulations of proteins with continuous potentials., , , and . J. Comput. Chem., 22 (12): 1287-1296 (2001)CAVE: A package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins., , , , and . Comput. Phys. Commun., 181 (12): 2116-2125 (2010)CAVE-CL: An OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins., , , , and . Comput. Phys. Commun., (2015)PBCAVE: Program for exact classification of the mesh points of a protein with possible internal cavities and its application to Poisson-Boltzmann equation solution., , , , , , and . Comput. Phys. Commun., (2020)Helix-coil transition in closed circular DNA, , , , , and . Physica A: Statistical Mechanics and its Applications, (Mar 15, 2005)Microscopical approach to the helix-coil transition in DNA, , , and . Physica A: Statistical Mechanics and its Applications, 281 (1-4): 51--59 (Jun 15, 2000)Enveloping triangulation method for detecting internal cavities in proteins and algorithm for computing their surface areas and volumes., , , , and . J. Comput. Chem., 30 (3): 346-357 (2009)Efficient combination of Wang-Landau and transition matrix Monte Carlo methods for protein simulations., , and . J. Comput. Chem., 28 (3): 715-726 (2007)ARVO-CL: The OpenCL version of the ARVO package - An efficient tool for computing the accessible surface area and the excluded volume of proteins via analytical equations., , , , and . Comput. Phys. Commun., 183 (11): 2494-2497 (2012)