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TGx-DDI, a Transcriptomic Biomarker for Genotoxicity Hazard Assessment of Pharmaceuticals and Environmental Chemicals., , , , , , , , , and . Frontiers Big Data, (2019)Trimming of mammalian transcriptional networks using network component analysis., , and . BMC Bioinform., (2010)Salmonella modulates metabolism during growth under conditions that induce expression of virulence genes., , , , , , , , , and 6 other author(s). Molecular bioSystems, 9 (6): 1522--1534 (Jun 7, 2013)Towards genome-scale signalling network reconstructions., and . Nature reviews. Genetics, 11 (4): 297--307 (Apr 23, 2010)An experimentally-supported genome-scale metabolic network reconstruction for Yersinia pestis CO92., , , , , , , , and . BMC Syst. Biol., (2011)Analysis of omics data with genome-scale models of metabolism, , and . Mol. BioSyst., 9 (2): 167--174 (Feb 2, 2013)Model-driven multi-omic data analysis elucidates metabolic immunomodulators of macrophage activation, , , , , , , , , and 3 other author(s). Molecular Systems Biology, (Jun 26, 2012)In silico method for modelling metabolism and gene product expression at genome scale., , , , , , , , , and 1 other author(s). Nature communications, (Jul 3, 2012)Genome-scale models of metabolism and gene expression extend and refine growth phenotype prediction, , , , and . Molecular Systems Biology, (Oct 1, 2013)Quantitative prediction of cellular metabolism with constraint-based models: the COBRA Toolbox v2.0, , , , , , , , , and 3 other author(s). Nat. Protoc., (2011)