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Protein similarity search under mRNA structural constraints: application to selenocysteine incorporation.

, , and . In Silico Biology, 2 (3): 275-290 (2002)

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Controlling Functional Uncertainty. CoRR, (1996)An Upper Bound for Number of Contacts in the HP-Model on the Face-Centered-Cubic Lattice (FCC).. CPM, volume 1848 of Lecture Notes in Computer Science, page 277-292. Springer, (2000)biRNA: Fast RNA-RNA Binding Sites Prediction., , and . WABI, volume 5724 of Lecture Notes in Computer Science, page 25-36. Springer, (2009)Excluding Symmetries in Constraint-Based Search., and . CP, volume 1713 of Lecture Notes in Computer Science, page 73-87. Springer, (1999)A New Distance Measure of RNA Ensembles and Its Application to Phylogenetic Tree Construction., and . CIBCB, page 150-157. IEEE, (2005)Using constraint programming for lattice protein folding.. German Conference on Bioinformatics, page 123. Oxford University Press, (1997)INFO-RNA - a server for fast inverse RNA folding satisfying sequence constraints., and . Nucleic Acids Res., 35 (Web-Server-Issue): 310-313 (2007)CopraRNA and IntaRNA: predicting small RNA targets, networks and interaction domains., , , , , , , , and . Nucleic Acids Res., 42 (Webserver-Issue): 119-123 (2014)IntaRNA 2.0: enhanced and customizable prediction of RNA-RNA interactions., , and . Nucleic Acids Res., 45 (Webserver-Issue): W435-W439 (2017)A Complete Axiomatization of a Theory with Feature and Arity Constraints.. J. Log. Program., 24 (1&2): 37-71 (1995)