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Using Information Theory to Discover Side Chain Rotamer Classes: Analysis of the Effects of Local Backbone Structure., and . Pacific Symposium on Biocomputing, page 278-289. (1999)Continuous Cotemporal Probabilistic Modeling of Systems Biology Networks from Sparse Data., , and . IEEE ACM Trans. Comput. Biol. Bioinform., 8 (5): 1208-1222 (2011)Comparison of Co-temporal Modeling Algorithms on Sparse Experimental Time Series Data Sets., , , , , and . BIBE, page 79-85. IEEE Computer Society, (2010)PREX: PeroxiRedoxin classification indEX, a database of subfamily assignments across the diverse peroxiredoxin family., , , , , and . Nucleic Acids Res., 39 (Database-Issue): 332-337 (2011)Reconstructing networks using co-temporal functions., , , , and . ACM Southeast Regional Conference, page 417-422. ACM, (2006)Scientific Software Development Is Not an Oxymoron., , , and . PLoS Comput. Biol., (2006)The shuffle index and evaluation of models of signal transduction pathways., , , , , and . ACM Southeast Regional Conference, page 250-255. ACM, (2007)Bioinformatics and computing curriculum: a new model for interdisciplinary courses., and . SIGCSE, page 185-189. ACM, (2006)Computational modeling of the effects of oxidative stress on the IGF-1 signaling pathway in human articular chondrocytes., , , and . BCB, page 71-78. ACM, (2010)Examining effects of variability on systems biology modeling algorithms., , , and . BCB, page 374-377. ACM, (2010)