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Rapid parameterization of small molecules using the force field toolkit.

, , , , and . J. Comput. Chem., 34 (32): 2757-2770 (2013)

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VMD as a Platform for Interactive Small Molecule Preparation and Visualization in Quantum and Classical Simulations., , , , , , and . J. Chem. Inf. Model., 63 (15): 4664-4678 (August 2023)Efficient Exploration of Membrane-Associated Phenomena at Atomic Resolution, , , , , , and . (2015)Lessons Learned from Responsive Molecular Dynamics Studies of the COVID-19 Virus., , , and . UrgentHPC@SC, page 1-10. IEEE, (2021)Rapid parameterization of small molecules using the force field toolkit., , , , and . J. Comput. Chem., 34 (32): 2757-2770 (2013)TopoGromacs: Automated Topology Conversion from CHARMM to GROMACS within VMD., , , , and . J. Chem. Inf. Model., 56 (6): 1112-1116 (2016)End-to-end AI Framework for Hyperparameter Optimization, Model Training, and Interpretable Inference for Molecules and Crystals., , , , , and . CoRR, (2022)Classical force field parameters for the heme prosthetic group of cytochrome c., , , and . J. Comput. Chem., 25 (13): 1613-1622 (2004)Assembly and Analysis of Cell-Scale Membrane Envelopes., , , and . J. Chem. Inf. Model., 62 (3): 602-617 (2022)Prediction of Diblock Copolymer Morphology via Machine Learning., , , , , , and . CoRR, (2023)GHP-MOFassemble: Diffusion modeling, high throughput screening, and molecular dynamics for rational discovery of novel metal-organic frameworks for carbon capture at scale., , , , , , , and . CoRR, (2023)