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k-difference matching in amortized linear time for all the words in a text.

. Theor. Comput. Sci., 410 (8-10): 983-987 (2009)

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Fast Search Algorithms for Position Specific Scoring Matrices., , and . BIRD, volume 4414 of Lecture Notes in Computer Science, page 239-250. Springer, (2007)Efficient algorithms for the discovery of gapped factors., , and . Algorithms Mol. Biol., (2011)Alignment Free Sequence Similarity with Bounded Hamming Distance., , and . DCC, page 183-192. IEEE, (2014)Fast Approximation of Frequent k-Mers and Applications to Metagenomics., , and . J. Comput. Biol., 27 (4): 534-549 (2020)Higher recall in metagenomic sequence classification exploiting Overlapping Reads., , and . ICCABS, page 1. IEEE Computer Society, (2016)Fast Approximation of Frequent k-mers and Applications to Metagenomics., , and . RECOMB, volume 11467 of Lecture Notes in Computer Science, page 208-226. Springer, (2019)FSH: fast spaced seed hashing exploiting adjacent hashes., , and . Algorithms Mol. Biol., 13 (1): 8:1-8:11 (2018)Finding Significant Matches of Position Weight Matrices in Linear Time., , and . IEEE ACM Trans. Comput. Biol. Bioinform., 8 (1): 69-79 (2011)Efficient Algorithms for Sequence Analysis with Entropic Profiles., , , , and . IEEE ACM Trans. Comput. Biol. Bioinform., 15 (1): 117-128 (2018)Monotone Scoring of Patterns with Mismatches: (Extended Abstract)., and . WABI, volume 3240 of Lecture Notes in Computer Science, page 87-98. Springer, (2004)