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Diet, Epigenetic Events, and Cancer Prevention. Proceedings of a symposium, September 26-27, 2007.
? Nutr Rev (August 2008)
to Diet Epigenesis,_Genetic Humans Neoplasms,_genetics/prevention_/\&/_control by denilw on Jan 26, 2010, 8:35 PM
BibTeX (0)
Modeling ChIP sequencing in silico with applications.
Zhengdong D Zhang, Joel Rozowsky, Michael Snyder, Joseph Chang, and Mark Gerstein PLoS Comput. Biol. 4(8):e1000158 (2008)
to imported by denilw on Jan 26, 2010, 8:35 PM
DOI | BibTeX (0)
Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana.
Xiaoyu Zhang, Yana V Bernatavichute, Shawn Cokus, Matteo Pellegrini, and Steven E Jacobsen Genome Biol. 10(6):R62 (2009)
to imported by denilw on Jan 26, 2010, 8:35 PM
DOI | BibTeX (0)
Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
Daniel R Zerbino, and Ewan Birney Genome Res. 18(5):821-9 (2008)
to imported by denilw on Jan 26, 2010, 8:35 PM
DOI | BibTeX (0)
New scoring schema for finding motifs in DNA Sequences.
Fatemeh Zare-Mirakabad, Hayedeh Ahrabian, Mehdei Sadeghi, Abbas Nowzari-Dalini, and Bahram Goliaei BMC Bioinformatics (2009)
to imported by denilw and 1 other user on Jan 26, 2010, 8:35 PM
DOI | BibTeX (0)
Inferring causal relationships among different histone modifications and gene expression.
Hong Yu, Shanshan Zhu, Bing Zhou, Huiling Xue, and Jing-Dong J Han Genome Res. 18(8):1314-24 (August 2008)
to Bayes_Theorem Chromatin_Immunoprecipitation Gene_Expression_Regulation Gene_Regulatory_Networks Gene_Silencing Histones,_metabolism Humans Methylation Oligonucleotide_Array_Sequence_Analysis Repressor_Proteins,_metabolism Transcriptional_Activation by denilw on Jan 26, 2010, 8:35 PM
URL | DOI | BibTeX (0)
Combinatorial patterns of somatic gene mutations in cancer.
Chen-Hsiang Yeang, Frank McCormick, and Arnold Levine FASEB J. 22(8):2605-22 (2008)
to Cell_Cycle,_genetics Cell_Line,_Tumor Databases,_Genetic Genes,_Tumor_Suppressor Humans Models,_Genetic Mutation Neoplasms,_etiology/genetics Oncogenes Organ_Specificity Signal_Transduction,_genetics Stress,_Physiological,_genetics by denilw on Jan 26, 2010, 8:35 PM
URL | DOI | BibTeX (0)
Constructing immortalized human cell lines.
T R Yeager, and R R Reddel Curr. Opin. Biotechnol. 10(5):465-9 (1999)
to imported by denilw on Jan 26, 2010, 8:35 PM
BibTeX (0)
Identification of active transcriptional regulatory modules by the functional assay of DNA from nucleosome-free regions.
Mahesh Yaragatti, Claudio Basilico, and Lisa Dailey Genome Res 18(6):930-938 (June 2008)
to Animals Cell_Line Chromosome_Mapping DNA,_chemistry/isolation_/\&/_purification Deoxyribonucleases,_Type_II_Site-Specific Enhancer_Elements_(Genetics) Gene_Expression_Regulation Genomics,_methods Histones,_metabolism Mice Nucleosomes,_chemistry Polymerase_Chain_Reaction Promoter_Regions_(Genetics) Trans-Activation_(Genetics) by denilw on Jan 26, 2010, 8:35 PM
URL | DOI | BibTeX (0)
Assigning roles to protein mentions: the case of transcription factors.
Hui Yang, John Keane, Casey M Bergman, and Goran Nenadic J Biomed Inform 42(5):887-94 (2009)
to imported by denilw and 1 other user on Jan 26, 2010, 8:35 PM
DOI | BibTeX (0)
Solution structure and DNA-binding mode of the matrix attachment region-binding domain of the transcription factor SATB1 that regulates the T-cell maturation.
Hiroshi Yamaguchi, Masaru Tateno, and Kazuhiko Yamasaki J. Biol. Chem. 281(8):5319-27 (February 2006)
to Amino_Acid_Sequence Chromatin Cloning,_Molecular Conserved_Sequence DNA DNA_Methylation Hepatocyte_Nuclear_Factor_6 Humans Magnetic_Resonance_Spectroscopy Matrix_Attachment_Region_Binding_Proteins Models,_Molecular Molecular_Sequence_Data Mutation Protein_Binding Protein_Conformation Protein_Structure,_Secondary Protein_Structure,_Tertiary Surface_Plasmon_Resonance T-Lymphocytes by denilw on Jan 26, 2010, 8:35 PM
URL | DOI | BibTeX (0)
Identification and characterization of cell type-specific and ubiquitous chromatin regulatory structures in the human genome.
Hualin Xi, Hennady P Shulha, Jane M Lin, Teresa R Vales, Yutao Fu, David M Bodine, Ronald D G McKay, Josh G Chenoweth, Paul J Tesar, Terrence S Furey, Bing Ren, Zhiping Weng, and Gregory E Crawford PLoS Genet. 3(8):e136 (2007)
to imported by denilw on Jan 26, 2010, 8:35 PM
DOI | BibTeX (0)
An integrated approach to identifying cis-regulatory modules in the human genome.
Kyoung-Jae Won, Saurabh Agarwal, Li Shen, Robert Shoemaker, Bing Ren, and Wei Wang PLoS ONE 4(5):e5501 (2009)
to imported by denilw and 1 other user on Jan 26, 2010, 8:35 PM
DOI | BibTeX (0)
Sequence census methods for functional genomics.
Barbara Wold, and Richard M. Myers Nat Methods 5(1):19-21 (January 2008)
to Algorithms Chromatin_Immunoprecipitation,_trends Genomics,_trends Oligonucleotide_Array_Sequence_Analysis,_trends Sequence_Analysis,_DNA,_trends by denilw on Jan 26, 2010, 8:35 PM
URL | DOI | BibTeX (0)
Comparison of features of human breast cancer cell lines and their corresponding tumors.
I I Wistuba, C Behrens, S Milchgrub, S Syed, M Ahmadian, A K Virmani, V Kurvari, T H Cunningham, R Ashfaq, J D Minna, and A F Gazdar Clin. Cancer Res. 4(12):2931-8 (December 1998)
to Adult Aged Aged,_80_and_over Breast_Neoplasms,_genetics/pathology DNA,_Neoplasm,_analysis DNA_Mutational_Analysis Humans Immunohistochemistry Loss_of_Heterozygosity Middle_Aged Ploidies Receptor,_erbB-2,_biosynthesis Receptors,_Estrogen,_biosynthesis Receptors,_Progesterone,_biosynthesis Time_Factors Tumor_Cells,_Cultured Tumor_Suppressor_Protein_p53,_genetics by denilw on Jan 26, 2010, 8:35 PM
BibTeX (0)
Stromal effects on mammary gland development and breast cancer.
Bryony S Wiseman, and Zena Werb Science 296(5570):1046-9 (2002)
to imported by denilw on Jan 26, 2010, 8:35 PM
DOI | BibTeX (0)
Epigenetic regulation of gene expression in the inflammatory response and relevance to common diseases.
Anthony G Wilson J. Periodontol. 79(8 Suppl):1514-9 (August 2008)
to Aging,_genetics Autoimmune_Diseases,_genetics Chromatin,_genetics DNA_Methylation Disease Environment Epigenesis,_Genetic,_genetics Gene_Expression_Regulation,_genetics Histones,_genetics Humans Inflammation,_genetics Neoplasms,_genetics Nutrigenomics Transcription,_Genetic,_genetics by denilw on Jan 26, 2010, 8:35 PM
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The complete genome of an individual by massively parallel DNA sequencing.
David A. Wheeler, Maithreyan Srinivasan, Michael Egholm, Yufeng Shen, Lei Chen, Amy McGuire, Wen He, Yi-Ju Chen, Vinod Makhijani, G. Thomas Roth, Xavier Gomes, Karrie Tartaro, Faheem Niazi, Cynthia L. Turcotte, Gerard P. Irzyk, James R. Lupski, Craig Chinault, Xing-zhi Song, Yue Liu, Ye Yuan, Lynne Nazareth, Xiang Qin, Donna M. Muzny, Marcel Margulies, George M. Weinstock, Richard A. Gibbs, and Jonathan M. Rothberg Nature 452(7189):872-876 (April 2008)
to Alleles Computational_Biology Genetic_Predisposition_to_Disease,_genetics Genome,_Human,_genetics Genomics,_economics/methods/trends Genotype Humans Individuality Male Oligonucleotide_Array_Sequence_Analysis Polymorphism,_Single_Nucleotide,_genetics Reproducibility_of_Results Sensitivity_and_Specificity Sequence_Alignment Sequence_Analysis,_DNA,_economics/methods Software Variation_(Genetics),_genetics by denilw on Jan 26, 2010, 8:35 PM
URL | DOI | BibTeX (0)
Predicting the clinical status of human breast cancer by using gene expression profiles.
West, C Blanchette, H Dressman, E Huang, S Ishida, R Spang, H Zuzan, J A Olson, J R Marks, and J R Nevins Proc. Natl. Acad. Sci. U.S.A. 98(20):11462-7 (September 2001)
to Bacillus_anthracis Breast_Neoplasms,_enzymology/genetics/pathology/surgery Enzymes,_genetics Female Humans Lymph_Node_Excision Lymph_Nodes,_pathology Multigene_Family Oligonucleotide_Array_Sequence_Analysis Phenotype Predictive_Value_of_Tests Probability Receptors,_Estrogen,_analysis Reproducibility_of_Results by denilw on Jan 26, 2010, 8:35 PM
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SATB1 family protein expressed during early erythroid differentiation modifies globin gene expression.
Jie Wen, Suming Huang, Heather Rogers, Liliane A Dickinson, Terumi Kohwi-Shigematsu, and Constance Tom Noguchi Blood 105(8):3330-9 (April 2005)
to Cell_Differentiation Chromatin Erythroid_Cells Gene_Expression_Regulation,_Developmental Globins Hematopoietic_Stem_Cells Hemin Humans K562_Cells Matrix_Attachment_Region_Binding_Proteins Multigene_Family Nuclear_Proteins Trans-Activators Transcription,_Genetic Transfection by denilw on Jan 26, 2010, 8:35 PM
URL | DOI | BibTeX (0)

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