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Model comparison - BEAST Software
to BEAST Bayes_factor by ebo on Oct 2, 2009, 10:17 PM
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Beast-users Bayes factor discussion
to BEAST by ebo on Oct 2, 2009, 10:05 PM
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Sampling the Prior - BEAST Software
to BEAST by ebo on Sep 30, 2009, 9:08 PM
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publications

(15)

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Inference of demographic history from genealogical trees using reversible jump Markov chain Monte Carlo
Opgen-Rhein, L Fahrmeir, and K Strimmer BMC Evol Biol 5(1):6-6 (2005)
to BEAST MCMC imported phylogenetics popbio by ebo on Oct 14, 2009, 1:42 AM
URL | DOI | BibTeX (0)
Bayesian coalescent inference of past population dynamics from molecular sequences
A J Drummond, A Rambaut, B Shapiro, and O G Pybus Mol Biol Evol 22(5):1185-1192 (May 2005)
to BEAST imported skyline by ebo and 6 other users on Oct 14, 2009, 1:38 AM
URL | DOI | BibTeX (0)
Genomic Epidemiology of a Dengue Virus Epidemic in Urban Singapore
Mark J. Schreiber, Edward C. Holmes, Swee Hoe Ong, Harold S. H. Soh, Wei Liu, Lukas Tanner, Pauline P. K. Aw, Hwee Cheng Tan, Lee Ching Ng, Yee Sin Leo, Jenny G. H. Low, Adrian Ong, Eng Eong Ooi, Subhash G. Vasudevan, and Martin L. Hibberd J. Virol. 83(9):4163-4173 (2009)
to BEAST imported skyline by ebo on Oct 14, 2009, 1:38 AM
URL | DOI | BibTeX (0)
Bayesian coalescent inference of past population dynamics from molecular sequences.
A J Drummond, A Rambaut, B Shapiro, and O G Pybus Mol Biol Evol 22(5):1185--1192 (2005 May)
to BEAST popbio skyline by ebo and 6 other users on Oct 13, 2009, 10:15 PM
DOI | BibTeX (0)
The molecular population genetics of HIV-1 group O.
Philippe Lemey, Oliver G Pybus, Andrew Rambaut, Alexei J Drummond, David L Robertson, Pierre Roques, Michael Worobey, and Anne-Mieke Vandamme Genetics 167(3):1059--1068 (2004 Jul)
to BEAST HIV by ebo and 2 other users on Oct 13, 2009, 10:05 PM
URL | DOI | BibTeX (0)
Many-core algorithms for statistical phylogenetics
M A Suchard, and A Rambaut Bioinformatics 25(11):1370-1376 (June 2009)
to BEAST imported likelihood multi-core by ebo and 1 other user on Oct 4, 2009, 2:13 AM
URL | DOI | BibTeX (0)
Relaxed phylogenetics and dating with confidence
A J Drummond, S Y Ho, M J Phillips, and A Rambaut PLoS Biology (May 2006)
to BEAST imported phylogenetics sensitivity_analysis by ebo and 2 other users on Oct 3, 2009, 10:34 PM
URL | DOI | BibTeX (0)
Elevated substitution rates estimated from ancient DNA sequences
S Y Ho, S O Kolokotronis, and R G Allaby Biology Letters 3(6):702-705 (December 2007)
to BEAST TDMR imported sensitivity_analysis by ebo on Oct 2, 2009, 6:36 AM
URL | DOI | BibTeX (0)
Time dependency of molecular rate estimates and systematic overestimation of recent divergence times
S Y Ho, M J Phillips, A Cooper, and A J Drummond Mol Biol Evol 22(7):1561-1568 (July 2005)
to BEAST TDMR imported by ebo and 3 other users on Oct 2, 2009, 6:08 AM
URL | DOI | BibTeX (0)
Evidence for time dependency of molecular rate estimates
S Y Ho, B Shapiro, M J Phillips, A Cooper, and A J Drummond Systematic Biology 56(3):515-522 (June 2007)
to BEAST TDMR imported by ebo and 2 other users on Oct 2, 2009, 6:05 AM
URL | DOI | BibTeX (0)
Bayesian coestimation of phylogeny and sequence alignment
Lunter, I Miklós, A Drummond, J L Jensen, and J Hein BMC Bioinformatics (2005)
to BEAST alignment imported phylogenetics pulley by ebo on Oct 2, 2009, 5:54 AM
URL | DOI | BibTeX (0)
Bayesian selection of continuous-time Markov chain evolutionary models
M A Suchard, R E Weiss, and J S Sinsheimer Molecular Biology Evolution 18(6):1001-1013 (June 2001)
to BEAST bayesian imported model_selection by ebo on Sep 30, 2009, 9:02 PM
URL | BibTeX (0)
Bayesian phylogeography finds its roots
Lemey, A Rambaut, A J Drummond, and M A Suchard PLoS Comput Biol (September 2009)
to BEAST Bayesian imported molecular phylogenetics phylogeography software by ebo and 3 other users on Sep 26, 2009, 9:40 PM
URL | DOI | BibTeX (0)
Alarm Bells for the Molecular Clock? No Support for Ho et al.'s Model of Time-Dependent Molecular Rate Estimates
Brent C. Emerson Systematic Biology 56(2):337-345 (2007)
to BEAST PhyloSem heterochronous imported phylogenetics by ebo on Sep 21, 2009, 5:14 AM
URL | DOI | BibTeX (0)
Hantavirus evolution in relation to its rodent and insectivore hosts: no evidence for codivergence
Ramsden, E C Holmes, and M A Charleston Molecular Biology and Evolution 26(1):143-153 (January 2009)
to BEAST Bayesian coalescent coevolution dl hc imported lab_meeting phylogenetics zoonotic by ebo on Sep 16, 2009, 9:44 PM
URL | DOI | BibTeX (0)

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