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(9)

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David Welch — CIDD
to evolution networks people phylogenetics selection virus by ebo on Mar 5, 2010, 11:07 PM
(0)
Spatial phylodynamics of HIV-1 epidemic emergence in east Africa
to HIV epi phylogenetics spatial by ebo on Oct 27, 2009, 11:01 PM
(0)
ETH - Theoretical Biology - Stadler, Tanja
ETH Zuerich
to biology people phylogenetics theoretical by ebo on Oct 1, 2009, 10:40 PM
(0)
Tracking the evolution and geographic spread of Influenza A - ein Knol-Artikel von Donovan Parks
The 2009 swine-origin strain of Influenza A H1N1 has spread to nearly all parts of the world, with 175 countries reporting...
to contact epi network phylogenetics software by ebo on Sep 24, 2009, 5:22 PM
(0)
Jack O'Brien
to people phylogenetics statistics winmong by ebo on Aug 19, 2009, 8:02 PM
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HowTo/Phylogenetic Independent Contrasts - R-Phylo Wiki
to evolution phylogenetics statistics by ebo on Aug 14, 2009, 8:07 PM
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dechronization: Stop Using the Mantel Test
to phylogenetics statistics by ebo on Aug 4, 2009, 5:09 AM
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TreeTapper.org
portal to finding correct software or methods for phylogenetics analysis
to phylogenetics software statistics by ebo on Aug 4, 2009, 4:15 AM
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Pandemic (H1N1) 2009, Influenza Virus Resource
GenBank sequences from pandemic (H1N1) 2009
to epi molecular phylogenetics by ebo and 1 other user on Aug 2, 2009, 3:43 AM
(0)

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publications

(47)

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A Network Approach to Understanding Pathogen Population Structure
Caroline O. Buckee, and Sunetra Gupta Infectious Disease Informatics (2010)
to antigenic evolution imported influenza network phylogenetics by ebo on Jan 11, 2010, 11:17 PM
URL | BibTeX (0)
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
Masami Hasegawa, Hirohisa Kishino, and Taka aki Yano Journal of Molecular Evolution 22(2):160--174 (October 1985)
to dating imported phylogenetics by ebo and 1 other user on Oct 30, 2009, 12:23 AM
URL | BibTeX (0)
Likelihood-Based Tests of Topologies in Phylogenetics
Nick Goldman, Jon P. Anderson, and Allen G. Rodrigo Systematic Biology 49(4):652-670 (2000)
to imported likelihood phylogenetics by ebo on Oct 30, 2009, 12:20 AM
URL | DOI | BibTeX (0)
Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees
K. Liu, S. Raghavan, S. Nelesen, C. R. Linder, and T. Warnow Science (June 2009)
to imported phylogenetics by ebo and 2 other users on Oct 27, 2009, 11:46 PM
DOI | BibTeX (0)
Inferring phylogenies
J. Felsenstein Sinauer Associates, (2003)
to phylogenetics by ebo and 2 other users on Oct 27, 2009, 10:45 PM
BibTeX (0)
The Number of Evolutionary Trees
Joseph Felsenstein Systematic Biology 27(1):27-33 (1978)
to imported phylogenetics by ebo on Oct 27, 2009, 8:43 PM
URL | DOI | BibTeX (0)
The Effect of Ambiguous Data on Phylogenetic Estimates Obtained by Maximum Likelihood and Bayesian Inference
Alan R. Lemmon, Jeremy M. Brown, Kathrin Stanger-Hall, and Emily Moriarty Lemmon Syst Biol 58(1):130-145 (2009)
to imported lab_meeting phylogenetics by ebo and 2 other users on Oct 23, 2009, 5:20 AM
URL | DOI | BibTeX (0)
Inference of demographic history from genealogical trees using reversible jump Markov chain Monte Carlo
Opgen-Rhein, L Fahrmeir, and K Strimmer BMC Evol Biol 5(1):6-6 (2005)
to BEAST MCMC imported phylogenetics popbio by ebo on Oct 14, 2009, 1:42 AM
URL | DOI | BibTeX (0)
Relaxed phylogenetics and dating with confidence
A J Drummond, S Y Ho, M J Phillips, and A Rambaut PLoS Biology (May 2006)
to BEAST imported phylogenetics sensitivity_analysis by ebo and 2 other users on Oct 3, 2009, 10:34 PM
URL | DOI | BibTeX (0)
BigFoot: Bayesian alignment and phylogenetic footprinting with MCMC
Satija, A Novák, I Miklós, R Lyngso, and J Hein BMC Evolutionary Biology (2009)
to Bayesian alignment imported phylogenetics by ebo on Oct 2, 2009, 9:42 PM
URL | DOI | BibTeX (0)
Bayesian coestimation of phylogeny and sequence alignment
Lunter, I Miklós, A Drummond, J L Jensen, and J Hein BMC Bioinformatics (2005)
to BEAST alignment imported phylogenetics pulley by ebo on Oct 2, 2009, 5:54 AM
URL | DOI | BibTeX (0)
Evolutionary trees from DNA sequences: a maximum likelihood approach
Felsenstein Journal of Molecular Evolution 17(6):368-376 (1981)
to imported phylogenetics pulley statistics by ebo and 2 other users on Oct 2, 2009, 5:32 AM
URL | BibTeX (0)
Phylodynamics of Infectious Disease Epidemics
Erik M. Volz, Sergei L. Kosakovsky Pond, Melissa J. Ward, Andrew J. Leigh Brown, and Simon D.W. Frost Genetics (2009)
to epi imported phylogenetics by ebo on Oct 1, 2009, 10:21 PM
URL | DOI | BibTeX (0)
End-Epi: an application for inferring phylogenetic and population dynamical processes from molecular sequences
Rambaut, P H Harvey, and S Nee Comput Appl Biosci 13(3):303-306 (June 1997)
to imported phylogenetics software by ebo and 1 other user on Sep 27, 2009, 9:02 PM
URL | BibTeX (0)
Bayesian phylogeography finds its roots
Lemey, A Rambaut, A J Drummond, and M A Suchard PLoS Comput Biol (September 2009)
to BEAST Bayesian imported molecular phylogenetics phylogeography software by ebo and 3 other users on Sep 26, 2009, 9:40 PM
URL | DOI | BibTeX (0)
Alarm Bells for the Molecular Clock? No Support for Ho et al.'s Model of Time-Dependent Molecular Rate Estimates
Brent C. Emerson Systematic Biology 56(2):337-345 (2007)
to BEAST PhyloSem heterochronous imported phylogenetics by ebo on Sep 21, 2009, 5:14 AM
URL | DOI | BibTeX (0)
Hantavirus evolution in relation to its rodent and insectivore hosts: no evidence for codivergence
Ramsden, E C Holmes, and M A Charleston Molecular Biology and Evolution 26(1):143-153 (January 2009)
to BEAST Bayesian coalescent coevolution dl hc imported lab_meeting phylogenetics zoonotic by ebo on Sep 16, 2009, 9:44 PM
URL | DOI | BibTeX (0)
Using Avida to test the effects of natural selection on phylogenetic reconstruction methods
G I Hagstrom, D H Hang, C Ofria, and E Torng Artificial Life 10(2):157-166 (2004)
to dl hc imported phylogenetics sensitivity_analysis by ebo and 1 other user on Sep 16, 2009, 4:03 AM
URL | DOI | BibTeX (0)
Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic
G J Smith, D Vijaykrishna, J Bahl, S J Lycett, M Worobey, O G Pybus, S K Ma, C L Cheung, J Raghwani, S Bhatt, J S Peiris, Y Guan, and A Rambaut Nature 459(7250):1122-1125 (June 2009)
to imported influenza phylogenetics surveillance by ebo on Sep 13, 2009, 5:31 PM
URL | DOI | BibTeX (0)
Elevated substitution rate estimates from ancient DNA: model violation and bias of Bayesian methods
Navascués, and B C Emerson Molecular Ecology (September 2009)
to Bayesian coalescent heterochronous hot imported phylogenetics statistics by ebo on Sep 10, 2009, 6:57 PM
URL | DOI | BibTeX (0)

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