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1Michael Nachman - October 5, 2011 - MVZ
big picture talk.
11 years ago by @peter.ralph
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1Size bias for one and all
R. Arratia, L. Goldstein, and F. Kochman. Probability Surveys, (January 2019)
3 years ago by @peter.ralph
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branching_processes
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size_biasing
branching_processesreviewsize_biasing
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1Adaptive learning in continuous-time: techniques and theory
C. Lester. University of Oregon, PhD thesis, (2021)
3 years ago by @peter.ralph
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Hamilton-Jacobi-Bellman
Kalman_filter
economics
optimization
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Hamilton-Jacobi-BellmanKalman_filtereconomicsoptimizationreview
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1Novel genomic approaches to study antagonistic coevolution between hosts and parasites
H. Märkle, S. John, A. Cornille, P. Fields, and A. Tellier. Molecular Ecology, (2021)
3 years ago by @peter.ralph
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coevolution
host-parasite
review
coevolutionhost-parasitereview
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1How can we infer geography and history from gene frequencies?
J. Felsenstein. Journal of Theoretical Biology, 96 (1): 9--20 (May 1982)
3 years ago by @peter.ralph
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geographic_methods
migration_estimation
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geographic_methodsmigration_estimationreview
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1Developmental Bias and Evolution: A Regulatory Network Perspective
T. Uller, A. Moczek, R. Watson, P. Brakefield, and K. Laland. Genetics, 209 (4): 949-966 (July 2018)
3 years ago by @peter.ralph
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developmental_systems_drift
network_evolution
quantitative_genetics
regulatory_networks
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developmental_systems_driftnetwork_evolutionquantitative_geneticsregulatory_networksreview
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3Perspective: Evolution and detection of genetic robustness
J. de Visser, J. Hermisson, G. Wagner, L. Meyers, H. Bagheri-Chaichian, J. Blanchard, L. Chao, J. Cheverud, S. Elena, W. Fontana and 9 other author(s). Evolution, 57 (9): 1959-1972 (2003)
3 years ago by @peter.ralph
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regulatory_networks
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robustness
regulatory_networksreviewrobustness
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1Selected topics on reaction-diffusion-advection models from spatial ecology
K. Lam, S. Liu, and Y. Lou. (2020)cite arxiv:2004.07978.
3 years ago by @peter.ralph
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reaction-diffusion
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spatial_demography
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1Host–parasite co-evolution and its genomic signature
D. Ebert, and P. Fields. Nature Reviews Genetics, 21 (12): 754--768 (2020)
3 years ago by @peter.ralph
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coevolution
host-parasite
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coevolutionhost-parasitereview
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1Patterns, Process, and the Parable of the Coffeepot Incident: Arms Races Between Newts and Snakes from Landscapes to Molecules
E. Brodie. (2010)
3 years ago by @peter.ralph
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Taricha
coevolution
garter_snakes
newts
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Tarichacoevolutiongarter_snakesnewtsreview
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1How to estimate kinship
J. Goudet, T. Kay, and B. Weir. Molecular Ecology, 27 (20): 4121-4135 (2018)
4 years ago by @peter.ralph
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kinship
methods
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1Dos and don'ts of testing the geographic mosaic theory of coevolution
R. Gomulkiewicz, D. Drown, M. Dybdahl, W. Godsoe, S. Nuismer, K. Pepin, B. Ridenhour, C. Smith, and J. Yoder. Heredity, 98 (5): 249--258 (2007)
4 years ago by @peter.ralph
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coevolution
geographic_mosaic
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coevolutiongeographic_mosaicreview
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1Variation in infectivity and aggressiveness in space and time in wild host–pathogen systems: causes and consequences
A. Tack, P. Thrall, L. Barrett, J. Burdon, and A. Laine. Journal of Evolutionary Biology, 25 (10): 1918-1936 (2012)
4 years ago by @peter.ralph
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coevolution
geogric_mosaic
host-parasite
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510 Years of GWAS Discovery: Biology, Function, and Translation
P. Visscher, N. Wray, Q. Zhang, P. Sklar, M. McCarthy, M. Brown, and J. Yang. Am J Hum Genet, 101 (1): 5-22 (July 2017)
4 years ago by @peter.ralph
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GWAS
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GWASreview
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1Models of plant-pathogen coevolution
S. Frank. Trends in Genetics, 8 (6): 213 - 219 (1992)
4 years ago by @peter.ralph
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coevolution
host-parasite
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coevolutionhost-parasitereview
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1Biological and biomedical implications of the co-evolution of pathogens and their hosts
M. Woolhouse, J. Webster, E. Domingo, B. Charlesworth, and B. Levin. Nat Genet, 32 (4): 569-577 (December 2002)
4 years ago by @peter.ralph
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coevolution
host-parasite
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coevolutionhost-parasitereview
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1Complex Trait Prediction from Genome Data: Contrasting EBV in Livestock to PRS in Humans
N. Wray, K. Kemper, B. Hayes, M. Goddard, and P. Visscher. Genetics, 211 (4): 1131--1141 (April 2019)
4 years ago by @peter.ralph
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animal_breeding
domestication
polygenic_scores
polygenic_traits
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animal_breedingdomesticationpolygenic_scorespolygenic_traitsreview
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1Indirect measures of gene flow and migration: $F_ST 1/(4Nm + 1)$
M. Whitlock, and D. McCauley. Heredity (Edinb), (February 1999)
4 years ago by @peter.ralph
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F_ST
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spatial_structure
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2The frontier of simulation-based inference
K. Cranmer, J. Brehmer, and G. Louppe. (2019)
4 years ago by @peter.ralph
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review
simulation-based_inference
statistics
reviewsimulation-based_inferencestatistics
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2Inbreeding and Variance Effective Population Numbers
J. Crow, and C. Denniston. Evolution, 42 (3): 482--495 (1988)
4 years ago by @peter.ralph
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effective_population_size
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effective_population_sizereview
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1The genetic differentiation at quantitative trait loci under local adaptation
V. Le Corree, and A. Kremer. Molecular Ecology, 21 (7): 1548-1566 (2012)
4 years ago by @peter.ralph
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F_ST
Q_ST
local_adaptation
quantitative_genetics
quantitative_traits
reading_group
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1Michael Nachman - October 5, 2011 - MVZ

publications (hide)331
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1Size bias for one and all

1Adaptive learning in continuous-time: techniques and theory

1Novel genomic approaches to study antagonistic coevolution between hosts and parasites

1How can we infer geography and history from gene frequencies?

1Developmental Bias and Evolution: A Regulatory Network Perspective

3Perspective: Evolution and detection of genetic robustness

1Selected topics on reaction-diffusion-advection models from spatial ecology

1Host–parasite co-evolution and its genomic signature

1Patterns, Process, and the Parable of the Coffeepot Incident: Arms Races Between Newts and Snakes from Landscapes to Molecules

1How to estimate kinship

1Dos and don'ts of testing the geographic mosaic theory of coevolution

1Variation in infectivity and aggressiveness in space and time in wild host–pathogen systems: causes and consequences

510 Years of GWAS Discovery: Biology, Function, and Translation

1Models of plant-pathogen coevolution

1Biological and biomedical implications of the co-evolution of pathogens and their hosts

1Complex Trait Prediction from Genome Data: Contrasting EBV in Livestock to PRS in Humans

1Indirect measures of gene flow and migration: $F_ST 1/(4Nm + 1)$

2The frontier of simulation-based inference

2Inbreeding and Variance Effective Population Numbers

1The genetic differentiation at quantitative trait loci under local adaptation

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