@thesaiorg

Genetic Algorithm Based Approach for Obtaining Alignment of Multiple Sequences

D. Ruchi Gupta Dr. Pankaj Agarwal. International Journal of Advanced Computer Science and Applications(IJACSA) (2012)

Abstract

This paper presents genetic algorithm based solution for determing alignment of multiple molecular sequences. Two datasets from DNA families Canis\_familiaris and galaxy dataset have been considered for experimental work & analysis. Genetic operators like cross over rate, mutation rate can be defined by the user. Experiments & observations were recorded w.r.t variable parameters like fixed population size vs variable number of generations & vice versa, variable crossover & mutation rates. Comparative evaluation in terms of measure of fitness accuracy is also carried out w.r.t existing MSA tools like Maft, Kalign. Experimental results show that the proposed solution does offer better fitness accuracy rates.

Links and resources

URL:
http://ijacsa.thesai.org/
BibTeX key:
IJACSA.2012.031228
search on:

Comments and Reviews  
(0)

There is no review or comment yet. You can write one!

Tags


Cite this publication