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The PathOlogist: An Automated Tool for Pathway-Centric Analysis., , , and . BMC Bioinform., (2011)Breast cancer is marked by specific, Public T-cell receptor CDR3 regions shared by mice and humans., , , , , , , , , and 1 other author(s). PLoS Comput. Biol., (2021)A Language Model identifies population-level features of the T cell Receptor via self-supervised learning., and . TransAI, page 75-78. IEEE, (2022)Reactive Animation: Realistic Modeling of Complex Dynamic Systems., , and . Computer, 38 (1): 38-47 (2005)Biomarker robustness reveals the PDGF network as driving disease outcome in ovarian cancer patients in multiple studies., and . BMC Syst. Biol., (2012)PathWeigh - Quantifying the Behavior of Biochemical Pathway Cascades., and . IWBBIO (2), volume 13347 of Lecture Notes in Computer Science, page 346-352. Springer, (2022)The immune system and other cognitive systems., and . Complex., 6 (5): 14-21 (2001)MicroRNA-Gene Association As a Prognostic Biomarker in Cancer Exposes Disease Mechanisms., and . PLoS Comput. Biol., (2013)GENTLE: a novel bioinformatics tool for generating features and building classifiers from T cell repertoire cancer data., , , , and . BMC Bioinform., 24 (1): 32 (December 2023)Concurrency in Biological Modeling: Behavior, Execution and Visualization, , , , and . Electronic Notes in Theoretical Computer Science, 194 (3): 119--131 (January 2008)