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NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation.

, , , , and . BMC Bioinform., (2015)

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The evolution of imitation and mirror neurons in adaptive agents., and . Cogn. Syst. Res., 6 (3): 229-242 (2005)NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation., , , , and . BMC Bioinform., (2015)Topological Signatures of Species Interactions in Metabolic Networks., and . J. Comput. Biol., 16 (2): 191-200 (2009)Where next for microbiome research?, , , , , , , , , and 1 other author(s). PLoS biology, (January 2015)MIMOSA2: a metabolic network-based tool for inferring mechanism-supported relationships in microbiome-metabolome data., , , and . Bioinform., 38 (6): 1615-1623 (2022)Reconstructing the Genomic Content of Microbiome Taxa through Shotgun Metagenomic Deconvolution., , and . PLoS Comput. Biol., (2013)Decoupling Environment-Dependent and Independent Genetic Robustness across Bacterial Species., , , , , and . PLoS Comput. Biol., (2010)MetaLAFFA: a flexible, end-to-end, distributed computing-compatible metagenomic functional annotation pipeline., , and . BMC Bioinform., 21 (1): 471 (2020)Conservation of trans-acting circuitry during mammalian regulatory evolution, , , , , , , , , and 19 other author(s). Nature, 515 (7527): 365--370 (November 2014)Metagenomic systems biology of the human gut microbiome reveals topological shifts associated with obesity and inflammatory bowel disease, , and . Proceedings of the National Academy of Sciences, 109 (2): 594--599 (Jan 10, 2012)