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Explaining decisions of Graph Convolutional Neural Networks: patient-specific molecular subnetworks responsible for metastasis prediction in breast cancer

, , , , , , , , and . BioRxiv, (2020)

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BITES: Balanced Individual Treatment Effect for Survival data., , , , , , , , , and . CoRR, (2022)Graph based fusion of miRNA and mRNA expression data improves clinical outcome prediction in prostate cancer., , , , , , , , and . BMC Bioinform., (2011)Sequential Interim Analyses of Survival Data in DNA Microarray Experiments., , and . BMC Bioinform., (2011)Reconstruction of Different Modes of WNT Dependent Protein Networks from Time Series Protein Quantification., , , , , , , and . GMDS, volume 267 of Studies in Health Technology and Informatics, page 175-180. IOS Press, (2019)A systematic approach for comprehensive T-cell epitope discovery using peptide libraries., , , , and . ISMB (Supplement of Bioinformatics), page 29-37. (2005)Ensemble-GNN: federated ensemble learning with graph neural networks for disease module discovery and classification., , , , , , , , and . Bioinform., (October 2023)rBiopaxParser - an R package to parse, modify and visualize BioPAX data., , , , and . Bioinform., 29 (4): 520-522 (2013)Utilization of ordinal response structures in classification with high-dimensional expression data., , and . GCB, volume 34 of OASIcs, page 90-100. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, (2013)Predicting the Effect of Variants of Unknown Significance in Molecular Tumor Boards with the VUS-Predict Pipeline., , , , , , , , and . GMDS, volume 283 of Studies in Health Technology and Informatics, page 209-216. IOS Press, (2021)Extending pathways based on gene lists using InterPro domain signatures., , , , , and . BMC Bioinform., (2008)