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Interface Similarity Improves Comparison of DNA-Binding Proteins: The Homeobox Example., , and . JBI, volume 6620 of Lecture Notes in Computer Science, page 72-82. Springer, (2010)RegulonDB (version 6.0): gene regulation model of Escherichia coli K-12 beyond transcription, active (experimental) annotated promoters and Textpresso navigation., , , , , , , , , and 9 other author(s). Nucleic Acids Res., 36 (Database-Issue): 120-124 (2008)RSAT 2018: regulatory sequence analysis tools 20th anniversary., , , , , , , , , and 3 other author(s). Nucleic Acids Res., 46 (Webserver-Issue): W209-W214 (2018)TFmodeller: comparative modelling of protein-DNA complexes., , and . Bioinform., 23 (13): 1694-1696 (2007)Dissecting the expression patterns of transcription factors across conditions using an integrated network-based approach., and . Nucleic acids research, 38 (20): 6841--6856 (Nov 1, 2010)Domain Fishing: a first step in protein comparative modelling., and . Bioinform., 18 (8): 1141-1142 (2002)Prediction of TF target sites based on atomistic models of protein-DNA complexes., , , , and . BMC Bioinform., (2008)Gramene 2021: harnessing the power of comparative genomics and pathways for plant research., , , , , , , , , and 19 other author(s). Nucleic Acids Res., 49 (Database-Issue): D1452-D1463 (2021)primers4clades: a web server that uses phylogenetic trees to design lineage-specific PCR primers for metagenomic and diversity studies., , , and . Nucleic Acids Res., 37 (Web-Server-Issue): 95-100 (2009)3D-footprint: a database for the structural analysis of protein-DNA complexes.. Nucleic Acids Res., 38 (Database-Issue): 91-97 (2010)