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Assessment of HCV infection stage as recent or chronic using multi-parameter analysis and machine learning.

, , , , , and . ICCABS, page 1. IEEE Computer Society, (2017)

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A study of optimal cost-skew tradeoff and remaining suboptimality in interconnect tree constructions., , , and . SLIP@DAC, page 2:1-2:8. ACM, (2018)Reconstructing viral quasispecies from NGS amplicon reads., , , , , and . In Silico Biology, 11 (5-6): 237-249 (2012)Alignment of DNA Mass-Spectral Profiles Using Network Flows., , , , , , and . ISBRA, volume 7875 of Lecture Notes in Computer Science, page 149-160. Springer, (2013)Multiple Linear Regression for Index SNP Selection on Unphased Genotypes., and . EMBC, page 5759-5762. IEEE, (2006)Agent-Based in Silico Evolution of HCV Quasispecies., , , , , and . ISBRA, volume 10330 of Lecture Notes in Computer Science, page 420-424. Springer, (2017)VGA: A method for viral quasispecies assembly from ultra-deep sequencing data., , , , , and . ICCABS, page 1. IEEE Computer Society, (2014)Efficient filtering algorithm for detection of genetic similarity between large genomic datasets., , , , , and . ICCABS, page 1. IEEE Computer Society, (2017)ScaffMatch: scaffolding algorithm based on maximum weight matching., and . Bioinform., 31 (16): 2632-2638 (2015)Searching High-Order SNP Combinations for Complex Diseases Based on Energy Distribution Difference., , , , , and . IEEE ACM Trans. Comput. Biol. Bioinform., 12 (3): 695-704 (2015)Scalable Reconstruction of SARS-CoV-2 Phylogeny with Recurrent Mutations., , , , , and . J. Comput. Biol., 28 (11): 1130-1141 (2021)