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Recon 2.2: from reconstruction to model of human metabolism, , , , , , , , , and 15 other author(s). Metabolomics, (2016)Genome-scale model-driven strain design for dicarboxylic acid production in Yarrowia lipolytica., , , , , and . BMC Syst. Biol., 12 (S-2): 9-20 (2018)Unraveling the light-specific metabolic and regulatory signatures of rice through combined in silico modeling and multi-omics analysis., , , , , and . Plant physiology, (Oct 9, 2015)Modeling Rice Metabolism: From Elucidating Environmental Effects on Cellular Phenotype to Guiding Crop Improvement., , , and . Frontiers in plant science, (2016)Genome-scale metabolic modeling and in silico analysis of lipid accumulating yeast Candida tropicalis for dicarboxylic acid production., , , , , , , , and . Biotechnology and bioengineering, 113 (9): 1993--2004 (September 2016)Software applications for flux balance analysis., , , and . Briefings Bioinform., 15 (1): 108-122 (2014)Cofactor Modification Analysis: a Computational Framework to Identify cofactor specificity Engineering targets for strain Improvement., , , , and . J. Bioinform. Comput. Biol., (2013)Metabolic and transcriptional regulatory mechanisms underlying the anoxic adaptation of rice coleoptile., , , , and . AoB plants, (Jun 3, 2014)Metabolic reconstruction and flux analysis of industrial Pichia yeasts., , , , and . Applied microbiology and biotechnology, 97 (5): 1865--1873 (March 2013)Identifying essential genes/reactions of the rice photorespiration by in silico model-based analysis., , and . Rice (New York, N.Y.), (2013)