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Application of Binding Free Energy Calculations to Prediction of Binding Modes and Affinities of MDM2 and MDMX Inhibitors., , , and . Journal of Chemical Information and Modeling, 52 (7): 1821-1832 (2012)Exploring the Conformational Transitions of Biomolecular Systems Using a Simple Two-State Anisotropic Network Model., , , , , and . PLoS Comput. Biol., (2014)PBEQ-Solver for online visualization of electrostatic potential of biomolecules., , , , and . Nucleic Acids Res., 36 (Web-Server-Issue): 270-275 (2008)CHARMM-GUI PACE CG Builder for Solution, Micelle, and Bilayer Coarse-Grained Simulations., , , , , and . Journal of Chemical Information and Modeling, 54 (3): 1003-1009 (2014)CHARMM-GUI Micelle Builder for Pure/Mixed Micelle and Protein/Micelle Complex Systems., , , , and . Journal of Chemical Information and Modeling, 53 (8): 2171-2180 (2013)Glycan Reader is improved to recognize most sugar types and chemical modifications in the Protein Data Bank., , , , , , and . Bioinform., 33 (19): 3051-3057 (2017)Glycan fragment database: a database of PDB-based glycan 3D structures., and . Nucleic Acids Res., 41 (Database-Issue): 470-474 (2013)GPU-specific algorithms for improved solute sampling in grand canonical Monte Carlo simulations., , , , , and . J. Comput. Chem., 44 (20): 1719-1732 (2023)Leveraging the Information from Markov State Models To Improve the Convergence of Umbrella Sampling Simulations, , , , and . The Journal of Physical Chemistry B, 120 (33): 8733-8742 (2016)PMID: 27409349.CHARMM-GUI: A web-based graphical user interface for CHARMM., , , and . J. Comput. Chem., 29 (11): 1859-1865 (2008)