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The Treeterbi and Parallel Treeterbi algorithms: efficient, optimal decoding for ordinary, generalized and pair HMMs., , and . Bioinform., 23 (5): 545-554 (2007)A human gut microbial gene catalogue established by metagenomic sequencing., , , , , , , , , and 44 other author(s). Nature, 464 (7285): 59--65 (Mar 4, 2010)EMPRR: a high-dimensional EM-based peicewise regression algorithm., and . ICMLA, page 264-271. IEEE Computer Society, (2004)Human gut microbes impact host serum metabolome and insulin sensitivity., , , , , , , , , and 24 other author(s). Nature, 535 (7612): 376--381 (Jul 21, 2016)MIntO: A Modular and Scalable Pipeline For Microbiome Metagenomic and Metatranscriptomic Data Integration., , , and . Frontiers Bioinform., (2022)MOCAT: A Metagenomics Assembly and Gene Prediction Toolkit, , , , , , , , , and 2 other author(s). PLOS ONE, 7 (10): e47656+ (Oct 17, 2012)SmashCell: a software framework for the analysis of single-cell amplified genome sequences., , , , and . Bioinform., 26 (23): 2979-2980 (2010)Pairagon: a highly accurate, HMM-based cDNA-to-genome aligner., , , and . Bioinform., 25 (13): 1587-1593 (2009)Genomic variation landscape of the human gut microbiome, , , , , , , , , and 4 other author(s). Nature, 493 (7430): 45--50 (Dec 5, 2012)Identification and assembly of genomes and genetic elements in complex metagenomic samples without using reference genomes, , , , , , , , , and 42 other author(s). Nature Biotechnology, 32 (8): 822--828 (Jul 6, 2014)