becker > correlation | BibSonomy

bookmarks (hide)21
display
all
bookmarks only
bookmarks per page
5
10
20
50
100
sort by
added at
title
RSS
BibTeX
XML

1CloudyDay - @HackMIT
http://cond.in/hackmit/
10 years ago by @becker
show all tags
correlation
graph
plot
sentiment
twitter
weather
correlationgraphplotsentimenttwitterweather
(0)
copydelete
- community post
- history of this post
1Response to “Perils of LOO crossvalidation”
http://not2hastie.tumblr.com/
5 years ago by @becker
show all tags
cross
validation
leave
one
out
loo
negative
correlation
linear
regression
elastic
net
en
crossvalidationleaveoneoutloonegativecorrelationlinearregressionelasticneten
(0)
copydelete
- community post
- history of this post
1The perils of leave-one-out crossvalidation for individual difference analyses
http://www.russpoldrack.org/2012/
5 years ago by @becker
show all tags
cross
validation
leave
one
out
loo
negative
correlation
linear
regression
elastic
net
en
crossvalidationleaveoneoutloonegativecorrelationlinearregressionelasticneten
(0)
copydelete
- community post
- history of this post
1A parallel and sparse approach to calculating correlations between columns of a Pandas DataFrame
https://gist.github.com/mgbckr/12d2f039173d3dffce20f0db3bac9159
5 years ago by @becker
show all tags
correlation
correlations
pearson
parallel
joblib
sparse
scipy
pandas
numpy
dataframe
df
fast
correlationcorrelationspearsonparalleljoblibsparsescipypandasnumpydataframedffast
(0)
copydelete
- community post
- history of this post
1How to use Pearson correlation correctly with time series - Cross Validated
https://stats.stackexchange.com/questions/133155/how-to-use-pearson-correlation-correctly-with-time-series
5 years ago by @becker
show all tags
spurious
correlation
pearson
time
series
timeseries
spuriouscorrelationpearsontimeseriestimeseries
(0)
copydelete
- community post
- history of this post
1Distance correlation - Wikipedia
https://en.wikipedia.org/wiki/Distance_correlation
5 years ago by @becker
show all tags
classifier
correlation
distance
nalab
classifiercorrelationdistancenalab
(0)
copydelete
- community post
- history of this post
1Lewandowski-Kurowicka-Joe (LKJ) distribution — Probability Distribution Explorer documentation
http://bois.caltech.edu/distribution_explorer/multivariate_continuous/lkj.html
4 years ago by @becker
show all tags
correlation
disruption
cordis
distribution
probability
matrix
covariance
multvariate
project
correlationdisruptioncordisdistributionprobabilitymatrixcovariancemultvariateproject
(0)
copydelete
- community post
- history of this post
1DGCA: A comprehensive R package for Differential Gene Correlation Analysis - PubMed
https://pubmed.ncbi.nlm.nih.gov/27846853/
4 years ago by @becker
show all tags
differential
gene
expression
correlation
disruption
cordis
differentialgeneexpressioncorrelationdisruptioncordis
(0)
copydelete
- community post
- history of this post
2Latent graph neural networks: Manifold learning 2.0? | by Michael Bronstein | Sep, 2020 | Towards Data Science
https://towardsdatascience.com/manifold-learning-2-99a25eeb677d
4 years ago by @becker
show all tags
cell
cnn
convolutional
correlation
disruption
dynamic
functional
graph
interaction
network
neural
nn
pointnet
single
cellcnnconvolutionalcorrelationdisruptiondynamicfunctionalgraphinteractionnetworkneuralnnpointnetsingle
(0)
copydelete
- community post
- history of this post
1ikizhvatov/efficient-columnwise-correlation: Efficient ways to compute Pearson's correlation between columns of two matrices in various scientific computing languages
https://github.com/ikizhvatov/efficient-columnwise-correlation
4 years ago by @becker
show all tags
correlation
cor
python
julia
r
comparison
efficient
fast
implementation
benchmark
correlationcorpythonjuliarcomparisonefficientfastimplementationbenchmark
(0)
copydelete
- community post
- history of this post
2Three correlations and a samosa – Picture this maths
https://picturethismaths.wordpress.com/2020/10/31/three-correlations-and-a-samosa/
3 years ago by @becker
show all tags
correlation
samosa
transitivity
pearson
correlationsamosatransitivitypearson
(0)
copydelete
- community post
- history of this post
1Bootstrapping Correlations
https://www.uvm.edu/~statdhtx/StatPages/Randomization%20Tests/BootstCorr/bootstrapping_correlations.html
3 years ago by @becker
show all tags
bootstrap
correlation
references
papers
bootstrapping
overview
example
bootstrapcorrelationreferencespapersbootstrappingoverviewexample
(0)
copydelete
- community post
- history of this post
1Large scale correlation mining: fundamental performance limits
http://web.eecs.umich.edu/~hero/Preprints/hero_duke_SAHD15.pdf
3 years ago by @becker
show all tags
correlation
mining
estimation
statistical
test
paper:fastcor
correlationminingestimationstatisticaltestpaper:fastcor
(0)
copydelete
- community post
- history of this post
1ryananeff/DGCA: DGCA 2.0: Highly Parallel and Memory-efficient Differential Correlation analysis
https://github.com/ryananeff/DGCA
3 years ago by @becker
show all tags
dgca
parallel
fast
differential
gene
analysis
correlation
paper:fastcor
dgcaparallelfastdifferentialgeneanalysiscorrelationpaper:fastcor
(0)
copydelete
- community post
- history of this post
1Differential co-expression-based detection of conditional relationships in transcriptional data: comparative analysis and application to breast cancer | SpringerLink
https://link.springer.com/article/10.1186/s13059-019-1851-8
3 years ago by @becker
show all tags
differential
coexpression
correlation
dgca
review
survey
gene
paper:fastcor
differentialcoexpressioncorrelationdgcareviewsurveygenepaper:fastcor
(0)
copydelete
- community post
- history of this post
1PyOD: a Unified Python Library for Anomaly Detection | by Alexandra Amidon | May, 2021 | Towards Data Science
https://towardsdatascience.com/pyod-a-unified-python-library-for-anomaly-detection-3608ec1fe321
3 years ago by @becker
show all tags
cordis
correlation
detection
disruption
outlier
cordiscorrelationdetectiondisruptionoutlier
(0)
copydelete
- community post
- history of this post
1shafferm/SCNIC: Sparse Cooccurence Network Investigation for Compositional data
https://github.com/shafferm/SCNIC
2 years ago by @becker
show all tags
project:fastcor
compositional
data
correlation
positive
co-occurrence
coocurrence
network
analysis
project:fastcorcompositionaldatacorrelationpositiveco-occurrencecoocurrencenetworkanalysis
(0)
copydelete
- community post
- history of this post
1scwatts/fastspar: Rapid and scalable correlation estimation for compositional data
https://github.com/scwatts/fastspar
2 years ago by @becker
show all tags
correlation
network
project:fastcor
algorithm
c
sparse
correlationnetworkproject:fastcoralgorithmcsparse
(0)
copydelete
- community post
- history of this post
1inference - How to infer correlations from correlations - Cross Validated
https://stats.stackexchange.com/questions/122888/how-to-infer-correlations-from-correlations
2 years ago by @becker
show all tags
correlation
bounds
interval
transitivity
transitive
cor
fastcor
corals
correlationboundsintervaltransitivitytransitivecorfastcorcorals
(0)
copydelete
- community post
- history of this post
1When is correlation transitive? | What's new
https://terrytao.wordpress.com/2014/06/05/when-is-correlation-transitive/
2 years ago by @becker
show all tags
correlation
transitivity
transitive
corals
fastcor
correlationtransitivitytransitivecoralsfastcor
(0)
copydelete
- community post
- history of this post

⟨⟨
⟨
1
2
⟩
⟩⟩

publications (hide)61
display
all
publications only
publications per page
5
10
20
50
100
sort by
added at
title
author
publication date
entry type
help for advanced sorting...
RSS
BibTeX
RDF
more...

3Explainable classification of brain networks via contrast subgraphs
T. Lanciano, F. Bonchi, and A. Gionis. Proceedings of the 26th ACM SIGKDD International Conference on Knowledge Discovery & Data Mining, page 3308--3318. (2020)
3 years ago by @becker
show all tags
kdd
contrast
subgraphs
graphs
correlation
disruption
networks
classification
explainable
interpretable
machine
learning
citedby:scholar:count:4
citedby:scholar:timestamp:2021-8-8
kddcontrastsubgraphsgraphscorrelationdisruptionnetworksclassificationexplainableinterpretablemachinelearningcitedby:scholar:count:4citedby:scholar:timestamp:2021-8-8
(0)
copydeleteadd this publication to your clipboard
1Forward regression in R: from the extreme slow to the extreme fast
M. Tsagris, and M. Papadakis. Journal of Data Science, 16 (4): 771--780 (2018)
3 years ago by @becker
show all tags
paper:fastcor
correlation
comparison
baseline
citedby:scholar:count:1
citedby:scholar:timestamp:2021-9-25
paper:fastcorcorrelationcomparisonbaselinecitedby:scholar:count:1citedby:scholar:timestamp:2021-9-25
(0)
copydeleteadd this publication to your clipboard
1Rfast: A Collection of Efficient and Extremely Fast R Functions
M. Papadakis, M. Tsagris, M. Dimitriadis, S. Fafalios, I. Tsamardinos, M. Fasiolo, G. Borboudakis, J. Burkardt, C. Zou, K. Lakiotaki and 1 other author(s). (2021)R package version 2.0.3.
3 years ago by @becker
show all tags
baseline
comparison
correlation
paper:fastcor
baselinecomparisoncorrelationpaper:fastcor
(0)
copydeleteadd this publication to your clipboard
2Fast R Functions for Robust Correlations and Hierarchical Clustering
P. Langfelder, and S. Horvath. Journal of Statistical Software, 46 (11): 1--17 (2012)
3 years ago by @becker
show all tags
baseline
comparison
correlation
paper:fastcor
baselinecomparisoncorrelationpaper:fastcor
(0)
copydeleteadd this publication to your clipboard
1Co-Operation: Fast Correlation, Covariance, and Cosine Similarity
D. Schmidt. (2021)R package version 0.6-3.
3 years ago by @becker
show all tags
baseline
comparison
correlation
paper:fastcor
baselinecomparisoncorrelationpaper:fastcor
(0)
copydeleteadd this publication to your clipboard
2CorDiffViz: an R package for visualizing multi-omics differential correlation networks
S. Yu, M. Drton, D. Promislow, and A. Shojaie. BMC bioinformatics, 22 (1): 1--12 (2021)
2 years ago by @becker
show all tags
correlation
difference
differential
visualization
network
networks
fastcor
paper:fastcor
correlationdifferencedifferentialvisualizationnetworknetworksfastcorpaper:fastcor
(0)
copydeleteadd this publication to your clipboard
1Measuring and testing dependence by correlation of distances
G. Székely, M. Rizzo, and N. Bakirov. The annals of statistics, 35 (6): 2769--2794 (2007)
2 years ago by @becker
show all tags
um1
correlation
distances
distance
citedby:scholar:count:1952
citedby:scholar:timestamp:2022-1-28
um1correlationdistancesdistancecitedby:scholar:count:1952citedby:scholar:timestamp:2022-1-28
(0)
copydeleteadd this publication to your clipboard
2Large-scale correlation network construction for unraveling the coordination of complex biological systems
M. Becker, H. Nassar, C. Espinosa, I. Stelzer, D. Feyaerts, E. Berson, N. Bidoki, A. Chang, G. Saarunya, A. Culos and 20 other author(s). Nature Computational Science, (April 2023)
2 years ago by @becker
show all tags
correlation
myown
project:2023-tracking
skipstats
correlationmyownproject:2023-trackingskipstats
(0)
copydeleteadd this publication to your clipboard
1Profiling functional disruption in biological systems
M. Becker, D. Feyaerts, I. Stelzer, E. Berson, A. Chang, C. Espinosa, D. Francesco, R. Fallahzadeh, I. Maric, S. Mataraso and 10 other author(s). Under review, (2022)
2 years ago by @becker
show all tags
correlation
disruption
functional
myown
skipstats
correlationdisruptionfunctionalmyownskipstats
(0)
copydeleteadd this publication to your clipboard
4A shrinkage approach to large-scale covariance matrix estimation and implications for functional genomics
J. Schäfer, and K. Strimmer. Statistical applications in genetics and molecular biology, (2005)
2 years ago by @becker
show all tags
paper:fastcor
regularization
correlation
citedby:scholar:count:1699
citedby:scholar:timestamp:2022-4-27
paper:fastcorregularizationcorrelationcitedby:scholar:count:1699citedby:scholar:timestamp:2022-4-27
(0)
copydeleteadd this publication to your clipboard
1Genetic and environmental perturbations lead to regulatory decoherence
A. Lea, M. Subramaniam, A. Ko, T. Lehtimäki, E. Raitoharju, M. Kähönen, I. Seppälä, N. Mononen, O. Raitakari, M. Ala-Korpela and 1 other author(s). Elife, (2019)
2 years ago by @becker
show all tags
cordis
differential
correlation
network
networks
coherence
decoherence
genetic
gene
regulatory
citedby:scholar:count:28
citedby:scholar:timestamp:2022-7-28
cordisdifferentialcorrelationnetworknetworkscoherencedecoherencegeneticgeneregulatorycitedby:scholar:count:28citedby:scholar:timestamp:2022-7-28
(0)
copydeleteadd this publication to your clipboard
1Partial correlation coefficients
B. Brown, and S. Hendrix. Encyclopedia of statistics in behavioral science, (2005)
2 years ago by @becker
show all tags
paper:fastcor
partial
correlation
coefficient
citedby:scholar:count:23
citedby:scholar:timestamp:2022-9-10
paper:fastcorpartialcorrelationcoefficientcitedby:scholar:count:23citedby:scholar:timestamp:2022-9-10
(0)
copydeleteadd this publication to your clipboard
1A tutorial on regularized partial correlation networks.
S. Epskamp, and E. Fried. Psychological methods, 23 (4): 617 (2018)
2 years ago by @becker
show all tags
paper:fastcor
partial
correlation
network
networks
citedby:scholar:count:1004
citedby:scholar:timestamp:2022-9-10
paper:fastcorpartialcorrelationnetworknetworkscitedby:scholar:count:1004citedby:scholar:timestamp:2022-9-10
(0)
copydeleteadd this publication to your clipboard
2Reducing bias and error in the correlation coefficient due to nonnormality
A. Bishara, and J. Hittner. Educational and psychological measurement, 75 (5): 785--804 (2015)
2 years ago by @becker
show all tags
paper:fastcor
correlation
coefficient
sampling
normality
bias
error
citedby:scholar:count:172
citedby:scholar:timestamp:2022-9-10
paper:fastcorcorrelationcoefficientsamplingnormalitybiaserrorcitedby:scholar:count:172citedby:scholar:timestamp:2022-9-10
(0)
copydeleteadd this publication to your clipboard
2Comparison of the predicted and observed secondary structure of T4 phage lysozyme
B. Matthews. Biochimica et Biophysica Acta (BBA)-Protein Structure, 405 (2): 442--451 (1975)
2 years ago by @becker
show all tags
paper:fastcor
phi
coefficient
correlation
binary
citedby:scholar:count:4936
citedby:scholar:timestamp:2022-9-12
paper:fastcorphicoefficientcorrelationbinarycitedby:scholar:count:4936citedby:scholar:timestamp:2022-9-12
(0)
copydeleteadd this publication to your clipboard
2DCARS: differential correlation across ranked samples
S. Ghazanfar, D. Strbenac, J. Ormerod, J. Yang, and E. Patrick. Bioinformatics, 35 (5): 823--829 (2019)
2 years ago by @becker
show all tags
paper:fastcor
differential
correlation
analysis
citedby:scholar:count:5
citedby:scholar:timestamp:2022-9-18
paper:fastcordifferentialcorrelationanalysiscitedby:scholar:count:5citedby:scholar:timestamp:2022-9-18
(0)
copydeleteadd this publication to your clipboard
2The discordant method: a novel approach for differential correlation
C. Siska, R. Bowler, and K. Kechris. Bioinformatics, 32 (5): 690--696 (2016)
2 years ago by @becker
show all tags
paper:fastcor
differential
correlation
analysis
citedby:scholar:count:28
citedby:scholar:timestamp:2022-9-18
paper:fastcordifferentialcorrelationanalysiscitedby:scholar:count:28citedby:scholar:timestamp:2022-9-18
(0)
copydeleteadd this publication to your clipboard
1DiffCorr: an R package to analyze and visualize differential correlations in biological networks
A. Fukushima. Gene, 518 (1): 209--214 (2013)
2 years ago by @becker
show all tags
paper:fastcor
differential
correlation
analysis
citedby:scholar:count:142
citedby:scholar:timestamp:2022-9-18
paper:fastcordifferentialcorrelationanalysiscitedby:scholar:count:142citedby:scholar:timestamp:2022-9-18
(0)
copydeleteadd this publication to your clipboard
1Corruption of the Pearson correlation coefficient by measurement error and its estimation, bias, and correction under different error models
E. Saccenti, M. Hendriks, and A. Smilde. Scientific reports, 10 (1): 1--19 (2020)
2 years ago by @becker
show all tags
paper:fastcor
correlation
error
data
bias
estimation
correction
citedby:scholar:count:53
citedby:scholar:timestamp:2022-9-23
paper:fastcorcorrelationerrordatabiasestimationcorrectioncitedby:scholar:count:53citedby:scholar:timestamp:2022-9-23
(0)
copydeleteadd this publication to your clipboard
6The max-min hill-climbing Bayesian network structure learning algorithm
I. Tsamardinos, L. Brown, and C. Aliferis. Machine learning, 65 (1): 31--78 (2006)
2 years ago by @becker
show all tags
paper:fastcor
partial
correlation
causation
bayesian
bayes
network
citedby:scholar:count:1912
citedby:scholar:timestamp:2022-9-23
paper:fastcorpartialcorrelationcausationbayesianbayesnetworkcitedby:scholar:count:1912citedby:scholar:timestamp:2022-9-23
(0)
copydeleteadd this publication to your clipboard

⟨⟨
⟨
1
2
3
⟩
⟩⟩