закладки (спрятать)110
- cchar, v. 1.6: Count characters in sequence data. cpg, v. 0.7: Compute the CpG content of DNA sequences. cutSeq, v. 0.11: Cut regions from molecular sequences. generateQuerySbjct, v. 0.4: Generate pairs of homologous DNA sequences. gd, v. 0.12: Calculate genetic diversity (pi, S, and Tajima's D) from aligned DNA sequences with or without sliding window. getSeq, v. 0.4: Get specific sequences from a FASTA file containing multiple entries. ms2dna, v. 1.16: Generate samples of homologous DNA sequences evolved under defined evolutionary scenarios by converting the output of Richard Hudson's coalescent simulation program ms. As of version 1.11, it can also deal with output generated by Gary Chen's fast coalescent simulator MaCS using the pipeline macs [options] | msformatter | ms2dna -a. randomizeSeq, v. 0.8: Randomize sequences. sequencer, v. 1.14: Simulate shotgun sequencing with paired (as of version 1.11) or unpaired reads and a user-defined error rate. simK, v. 0.4: Simulate pair of sequences with given number of substitutions/site (K).
- A very nice set of references.
- note BIOS viewer
- Where should that paper go?
- Species Distribution Modelling Tools: Tools for processing data associated with species distribution modelling exercises
- converts markdown, latex, html, html5 slides... (not xml)
- has link to pdf
- NIH XML article standard
- by Vince Buffalo
публикации (спрятать)3422
- The American Naturalist, 0 (ja): null (2024)
- Nature Genetics, (24.09.2024)
- bioRxiv, (2024)
- Genetics Selection Evolution, 53 (1): 55 (29.06.2021)
- Proceedings of the National Academy of Sciences, 118 (40): e2105841118 (2021)
- (2024)
- PLOS Genetics, 18 (11): 1-25 (ноября 2022)
- Methods in Ecology and Evolution, 2 (1): 11-22 (2011)
- Electronic Journal of Probability, 29 (none): 1 -- 85 (2024)
- (2023)
