%0 Journal Article %1 Krach2014Flux %A Krach, Christian %A Junker, Astrid %A Rohn, Hendrik %A Schreiber, Falk %A Junker, Björn H. %D 2014 %J Methods in molecular biology (Clifton, N.J.) %K flux-analysis tool visualisation %P 225--233 %R 10.1007/978-1-4939-1170-7\_14 %T Flux visualization using VANTED/FluxMap. %U http://dx.doi.org/10.1007/978-1-4939-1170-7\_14 %V 1191 %X The calculation of metabolic fluxes has been shown to be a valuable asset in systems biology. Several procedures are commonly used to achieve this. Flux balance analyses or metabolic flux analyses usually result in a list of reaction rates (fluxes) provided in a spreadsheet format. This makes it difficult to quickly assess general characteristics of the solution. A fast and easy mapping of these results to a graphical map template facilitates an easy visual data inspection. Here, we describe a protocol that helps in setting up user-specific network templates, mapping flux results to it, and creating multiple exportable flux maps at one time.

@article{Krach2014Flux, abstract = {The calculation of metabolic fluxes has been shown to be a valuable asset in systems biology. Several procedures are commonly used to achieve this. Flux balance analyses or metabolic flux analyses usually result in a list of reaction rates (fluxes) provided in a spreadsheet format. This makes it difficult to quickly assess general characteristics of the solution. A fast and easy mapping of these results to a graphical map template facilitates an easy visual data inspection. Here, we describe a protocol that helps in setting up user-specific network templates, mapping flux results to it, and creating multiple exportable flux maps at one time.}, added-at = {2018-12-02T16:09:07.000+0100}, author = {Krach, Christian and Junker, Astrid and Rohn, Hendrik and Schreiber, Falk and Junker, Bj\"{o}rn H.}, biburl = {https://www.bibsonomy.org/bibtex/23ae8263b400a8cd564bbfc4c530ae7b1/karthikraman}, citeulike-article-id = {13367294}, citeulike-linkout-0 = {http://dx.doi.org/10.1007/978-1-4939-1170-7\_14}, citeulike-linkout-1 = {http://view.ncbi.nlm.nih.gov/pubmed/25178794}, citeulike-linkout-2 = {http://www.hubmed.org/display.cgi?uids=25178794}, doi = {10.1007/978-1-4939-1170-7\_14}, interhash = {b5c4082f92150e28b57ed2f0a110a27e}, intrahash = {3ae8263b400a8cd564bbfc4c530ae7b1}, issn = {1940-6029}, journal = {Methods in molecular biology (Clifton, N.J.)}, keywords = {flux-analysis tool visualisation}, pages = {225--233}, pmid = {25178794}, posted-at = {2014-09-19 06:23:56}, priority = {2}, timestamp = {2018-12-02T16:09:07.000+0100}, title = {Flux visualization using {VANTED}/{FluxMap}.}, url = {http://dx.doi.org/10.1007/978-1-4939-1170-7\_14}, volume = 1191, year = 2014 }