Genetic programming (GP) is used to classify tumours
based on 1H nuclear magnetic resonance (NMR) spectra of
biopsy extracts. Analysis of such data would ideally
give not only a classification result but also indicate
which parts of the spectra are driving the
classification (i.e. feature selection). Experiments on
a database of variables derived from 1H NMR spectra
from human brain tumour extracts (n = 75) are reported,
showing GP's classification abilities and comparing
them with that of a neural network. GP successfully
classified the data into meningioma and non-meningioma
classes. The advantage over the neural network method
was that it made use of simple combinations of a small
group of metabolites, in particular glutamine,
glutamate and alanine. This may help in the choice of
the most informative NMR spectroscopy methods for
future non-invasive studies in patients.
%0 Journal Article
%1 gray:1998:GPcfs:aNMRshbtb
%A Gray, Helen F.
%A Maxwell, Ross J.
%A Martinez-Perez, Irene
%A Arus, Carles
%A Cerdan, Sebastian
%D 1998
%J NMR Biomedicine
%K algorithms, artificial brain classification, feature genetic intelligence, programming, selection tumour,
%N 4-5
%P 217--224
%R doi:10.1002/(SICI)1099-1492(199806/08)11:4/5<217::AID-NBM512>3.0.CO;2-4
%T Genetic programming for classification and feature
selection: analysis of 1H nuclear magnetic resonance
spectra from human brain tumour biopsies
%V 11
%X Genetic programming (GP) is used to classify tumours
based on 1H nuclear magnetic resonance (NMR) spectra of
biopsy extracts. Analysis of such data would ideally
give not only a classification result but also indicate
which parts of the spectra are driving the
classification (i.e. feature selection). Experiments on
a database of variables derived from 1H NMR spectra
from human brain tumour extracts (n = 75) are reported,
showing GP's classification abilities and comparing
them with that of a neural network. GP successfully
classified the data into meningioma and non-meningioma
classes. The advantage over the neural network method
was that it made use of simple combinations of a small
group of metabolites, in particular glutamine,
glutamate and alanine. This may help in the choice of
the most informative NMR spectroscopy methods for
future non-invasive studies in patients.
@article{gray:1998:GPcfs:aNMRshbtb,
abstract = {Genetic programming (GP) is used to classify tumours
based on 1H nuclear magnetic resonance (NMR) spectra of
biopsy extracts. Analysis of such data would ideally
give not only a classification result but also indicate
which parts of the spectra are driving the
classification (i.e. feature selection). Experiments on
a database of variables derived from 1H NMR spectra
from human brain tumour extracts (n = 75) are reported,
showing GP's classification abilities and comparing
them with that of a neural network. GP successfully
classified the data into meningioma and non-meningioma
classes. The advantage over the neural network method
was that it made use of simple combinations of a small
group of metabolites, in particular glutamine,
glutamate and alanine. This may help in the choice of
the most informative NMR spectroscopy methods for
future non-invasive studies in patients.},
added-at = {2008-06-19T17:35:00.000+0200},
author = {Gray, Helen F. and Maxwell, Ross J. and Martinez-Perez, Irene and Arus, Carles and Cerdan, Sebastian},
biburl = {https://www.bibsonomy.org/bibtex/2cd78e63237011653cfee4bca103d12dd/brazovayeye},
doi = {doi:10.1002/(SICI)1099-1492(199806/08)11:4/5<217::AID-NBM512>3.0.CO;2-4},
interhash = {25998ff4a6a1f456a7b70c50c311e8de},
intrahash = {cd78e63237011653cfee4bca103d12dd},
journal = {NMR Biomedicine},
keywords = {algorithms, artificial brain classification, feature genetic intelligence, programming, selection tumour,},
month = {June-August},
notes = {PMID: 9719576, UI: 98384081 Computer Science
Department, Arhus University, Denmark.},
number = {4-5},
pages = {217--224},
timestamp = {2008-06-19T17:40:36.000+0200},
title = {Genetic programming for classification and feature
selection: analysis of {1H} nuclear magnetic resonance
spectra from human brain tumour biopsies},
volume = 11,
year = 1998
}