Article,

Filter Based Approach for Genomic Feature Set Selection

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International Journal of Computer Science, Engineering and Applications (IJCSEA), 02 (01): 31-43 (February 2012)
DOI: 10.5121/ijcsea.2012.2104

Abstract

Feature selection is an effective method used in text categorization for sorting a set of documents into certain number of predefined categories. It is an important method for improving the efficiency and accuracy of text categorization algorithms by removing irredundant terms from the corpus. Genome contains the total amount of genetic information in the chromosomes of an organism, including its genes and DNA sequences. In this paper a Clustering technique called Hierarchical Techniques is used tocategories the Features from the Genome documents. A framework is proposed for Genomic Feature set Selection. A Filter based Feature Selection Method like  2 statistics, CHIR statistics are used to select the Feature set. The Selected Feature set is verified by using F-measure and it is biologically validated for Biological relevance using the BLAST tool.

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