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Force induced biopolymer unfolding

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Abstract Book of the XXIII IUPAP International Conference on Statistical Physics, Genova, Italy, (9-13 July 2007)

Abstract

Based on series expansions of unprecedented length, we study the unfolding of a two-dimensional polymer attached to a surface. The problem is modelled by an interacting self-avoiding walk (ISAW) $ Z^2$, with one end attached to the surface, and the other pulled, normal to the surface, with a force proportional to the perpendicular distance from the surface. We study the finite length partition function $$Z_N(F,T)=\sum_all \ saw w^m u^x = \sum_m,x C(N,m,x) w^m u^x,$$ where $C(N,m,x)$ is the number of ISAW of length $N$ having $m$ n-n contacts, and whose end-points are at a distance $x=x_N - x_0$ apart. Based on efficient finite-lattice method algorithms, extensive computer enumerations have provided data for chain lengths up to 55. A statistical mechanical description of flexible and semi-flexible polymer chains in a poor solvent is developed in the constant force and constant distance ensemble. We predict the existence of many intermediate states at low temperatures stabilised by the force. A uniform response to pulling and to compressing has been obtained in the constant distance ensemble. We show the signature of a cross-over length which increases linearly with chain length. Below this cross-over length, the critical force of unfolding decreases with temperature, while above it increases with temperature. For stiff chains, we find for the first time a ``saw-tooth'' like behaviour in the force-extension curves which has been seen earlier in the case of protein unfolding.

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