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In silico FRET from simulated dye dynamics., и . Comput. Phys. Commun., 184 (3): 841-852 (2013)Predicting slow structural transitions in macromolecular systems: Conformational flooding. Phys. Rev. E, 52 (3): 2893--2906 (сентября 1995)do_x3dna: a tool to analyze structural fluctuations of dsDNA or dsRNA from molecular dynamics simulations., и . Bioinform., 31 (15): 2583-2585 (2015)Microtubule instability driven by longitudinal and lateral strain propagation., и . PLoS Comput. Biol., (2020)Chromophore Protonation State Controls Photoswitching of the Fluoroprotein asFP595., , , , и . PLoS Comput. Biol., (2008)Conformational Dynamics of the Most Efficient Carboxylase Contributes to Efficient CO2 Fixation., , , и . J. Chem. Inf. Model., 63 (24): 7807-7815 (декабря 2023)Determining equilibrium constants for dimerization reactions from molecular dynamics simulations., , , , , и . J. Comput. Chem., 32 (9): 1919-1928 (2011)GROMEX: A Scalable and Versatile Fast Multipole Method for Biomolecular Simulation., , , , , , , , , и 2 other автор(ы). Software for Exascale Computing, том 136 из Lecture Notes in Computational Science and Engineering, Springer, (2020)BASDet: Bayesian approach(es) for structure determination from single molecule X-ray diffraction images., и . Comput. Phys. Commun., (2016)Corrigendum: g_membed: Efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbation., , , , и . J. Comput. Chem., 37 (21): 2038 (2016)