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Overview of the Pathway Curation (PC) task of BioNLP Shared Task 2013.

T. Ohta, S. Pyysalo, R. Rak, A. Rowley, H. Chun, S. Jung, S. Choi, S. Ananiadou, и J. Tsujii. BioNLP@ACL (Shared Task), стр. 67-75. Association for Computational Linguistics, (2013)

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Tomoko Ishibashi

Yusuke Ohta

Tomoko Kojima

Tomoko Watarai

Tomoko Elisabeth Emmerling

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An analysis of gene/protein associations at PubMed scale.S. Pyysalo, T. Ohta, и J. Tsujii. J. Biomed. Semant., 2 (S-5): S5 (2011)Building an Annotated Corpus in the Molecular-Biology Domain.Y. Tateisi, T. Ohta, N. Collier, C. Nobata, и J. Tsujii. SAIC@COLING, стр. 28-34. International Committee on Computational Linguistics, (2000)A Robust Retrieval Engine for Proximal and Structural Search.K. Masuda, T. Ninomiya, Y. Miyao, T. Ohta, и J. Tsujii. HLT-NAACL, The Association for Computational Linguistics, (2003)Bridging the Gap Between Scope-based and Event-based Negation/Speculation Annotations: A Bridge Not Too Far.P. Stenetorp, S. Pyysalo, T. Ohta, S. Ananiadou, и J. Tsujii. ExProM@ACL, стр. 47-56. Association for Computational Linguistics, (2012)brat: a Web-based Tool for NLP-Assisted Text Annotation.P. Stenetorp, S. Pyysalo, G. Topic, T. Ohta, S. Ananiadou, и J. Tsujii. EACL, стр. 102-107. The Association for Computer Linguistics, (2012)Event extraction for DNA methylation.T. Ohta, S. Pyysalo, M. Miwa, и J. Tsujii. Semantic Mining in Biomedicine, том 714 из CEUR Workshop Proceedings, CEUR-WS.org, (2010)Towards Exhaustive Event Extraction for Protein Modifications.S. Pyysalo, T. Ohta, M. Miwa, и J. Tsujii. BioNLP@ACL, стр. 114-123. Association for Computational Linguistics, (2011)Overview of the Epigenetics and Post-translational Modifications (EPI) task of BioNLP Shared Task 2011.T. Ohta, S. Pyysalo, и J. Tsujii. BioNLP@ACL (Shared Task), стр. 16-25. Association for Computational Linguistics, (2011)New Resources and Perspectives for Biomedical Event Extraction.S. Pyysalo, P. Stenetorp, T. Ohta, J. Kim, и S. Ananiadou. BioNLP@HLT-NAACL, стр. 100-108. Association for Computational Linguistics, (2012)Overview of BioNLP Shared Task 2013.C. Nédellec, R. Bossy, J. Kim, J. Kim, T. Ohta, S. Pyysalo, и P. Zweigenbaum. BioNLP@ACL (Shared Task), стр. 1-7. Association for Computational Linguistics, (2013)

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