Processing neuroimaging data on the cortical surface traditionally requires dedicated heavy-weight software suites. Here, we present an initial support of cortical surfaces in Python within the neuroimaging data processing toolbox Nilearn. We provide loading and plotting functions for different surface data formats with minimal dependencies, along with examples of their application. Limitations of the current implementation and potential next steps are discussed.
%0 Journal Article
%1 huntenburg2017loading
%A Huntenburg, Julia
%A Abraham, Alexandre
%A Loula, Jo\ ao
%A Liem, Franziskus
%A Dadi, Kamalaker
%A Varoquaux, Gaël
%D 2017
%J Research Ideas and Outcomes
%K nilearn, python cortical_surfaces neuroscience
%P e12342+
%R 10.3897/rio.3.e12342
%T Loading and plotting of cortical surface representations in Nilearn
%U http://riojournal.com/articles.php?id=12342
%V 3
%X Processing neuroimaging data on the cortical surface traditionally requires dedicated heavy-weight software suites. Here, we present an initial support of cortical surfaces in Python within the neuroimaging data processing toolbox Nilearn. We provide loading and plotting functions for different surface data formats with minimal dependencies, along with examples of their application. Limitations of the current implementation and potential next steps are discussed.
@article{huntenburg2017loading,
abstract = {{Processing neuroimaging data on the cortical surface traditionally requires dedicated heavy-weight software suites. Here, we present an initial support of cortical surfaces in Python within the neuroimaging data processing toolbox Nilearn. We provide loading and plotting functions for different surface data formats with minimal dependencies, along with examples of their application. Limitations of the current implementation and potential next steps are discussed.}},
added-at = {2018-12-07T09:10:16.000+0100},
author = {Huntenburg, Julia and Abraham, Alexandre and Loula, Jo\ {a}o and Liem, Franziskus and Dadi, Kamalaker and Varoquaux, Ga\"{e}l},
biburl = {https://www.bibsonomy.org/bibtex/20bb51e0619b1087c335e0c3896effc0b/jpvaldes},
citeulike-article-id = {14287857},
citeulike-linkout-0 = {http://riojournal.com/articles.php?id=12342},
citeulike-linkout-1 = {http://dx.doi.org/10.3897/rio.3.e12342},
day = 23,
doi = {10.3897/rio.3.e12342},
interhash = {40c7f4266cab92ddc841c198d868ad54},
intrahash = {0bb51e0619b1087c335e0c3896effc0b},
issn = {2367-7163},
journal = {Research Ideas and Outcomes},
keywords = {nilearn, python cortical_surfaces neuroscience},
month = feb,
pages = {e12342+},
posted-at = {2017-02-26 17:59:26},
priority = {3},
timestamp = {2018-12-07T09:38:09.000+0100},
title = {{Loading and plotting of cortical surface representations in Nilearn}},
url = {http://riojournal.com/articles.php?id=12342},
volume = 3,
year = 2017
}