%0 Journal Article %1 Freudenthal2020 %A Freudenthal, Jan A. %A Pfaff, Simon %A Terhoeven, Niklas %A Korte, Arthur %A Ankenbrand, Markus J. %A Förster, Frank %D 2020 %J Genome Biology %K arthurkorte bmd cctb evolgen janfreudenthal markusankenbrand niklasterhoeven %N 1 %P 254 %R 10.1186/s13059-020-02153-6 %T A systematic comparison of chloroplast genome assembly tools %U https://doi.org/10.1186/s13059-020-02153-6 %V 21 %X Chloroplasts are intracellular organelles that enable plants to conduct photosynthesis. They arose through the symbiotic integration of a prokaryotic cell into an eukaryotic host cell and still contain their own genomes with distinct genomic information. Plastid genomes accommodate essential genes and are regularly utilized in biotechnology or phylogenetics. Different assemblers that are able to assess the plastid genome have been developed. These assemblers often use data of whole genome sequencing experiments, which usually contain reads from the complete chloroplast genome.

@article{Freudenthal2020, abstract = {Chloroplasts are intracellular organelles that enable plants to conduct photosynthesis. They arose through the symbiotic integration of a prokaryotic cell into an eukaryotic host cell and still contain their own genomes with distinct genomic information. Plastid genomes accommodate essential genes and are regularly utilized in biotechnology or phylogenetics. Different assemblers that are able to assess the plastid genome have been developed. These assemblers often use data of whole genome sequencing experiments, which usually contain reads from the complete chloroplast genome.}, added-at = {2022-01-05T14:19:29.000+0100}, author = {Freudenthal, Jan A. and Pfaff, Simon and Terhoeven, Niklas and Korte, Arthur and Ankenbrand, Markus J. and F{\"o}rster, Frank}, biburl = {https://www.bibsonomy.org/bibtex/25abc9b92e97ac218d3bb6d590077cd76/iimog}, day = 28, description = {A systematic comparison of chloroplast genome assembly tools | SpringerLink}, doi = {10.1186/s13059-020-02153-6}, interhash = {e52a3bebb5ad80e1c5913cf0169f0448}, intrahash = {5abc9b92e97ac218d3bb6d590077cd76}, issn = {1474-760X}, journal = {Genome Biology}, keywords = {arthurkorte bmd cctb evolgen janfreudenthal markusankenbrand niklasterhoeven}, month = sep, number = 1, pages = 254, timestamp = {2022-01-05T14:21:04.000+0100}, title = {A systematic comparison of chloroplast genome assembly tools}, url = {https://doi.org/10.1186/s13059-020-02153-6}, volume = 21, year = 2020 }