CCPN is a public non-profit project, funded by the BBSRC, which serves the macromolecular NMR community and provides: * Meetings to determine and spread best practice in NMR * The CCP Data Model for macromolecular NMR and related areas * The CcpNmr programs suite: Format Converter
World Index of BioMolecular Visualization Resources Free Molecular Visualization and Modeling Software Caution: Some of free software listed here is Open Source in the strict sense, meaning that all derivatives are required to be free with open source code. If you plan to use the source code (not just the executable program), read the copyright restrictions carefully.
The Bioclipse project is aimed at creating a Java-based, open source, visual platform for chemo- and bioinformatics based on the Eclipse Rich Client Platform (RCP). Bioclipse, as any RCP application, is based on a plugin architecture that inherits basic functionality and visual interfaces from Eclipse, such as help system, software updates, preferences, cross-platform deployment etc.
LMOND is a program specifically developed for generating and handling alignment independent descriptors called GRIND (GRid INdependent Descriptors). These are a new generation of 3D-molecular descriptors with application in 3D-QSAR, QSAR, virtual screenin
iPad is a powerful, simple, flexible and free Electronic Laboratory Notebook for all those who take and use experimental research notes: researchers, technicians, group leaders, and R&D directors. It improves the management of research-related information
Simbiome is a curated, online electronic resource that organizes and presents relevant resources for physics-based simulation of biomedical structures and related entities in biology and life sciences.
Protected UsefulChem Project This is an open source science project in chemistry led by the Bradley Laboratory at Drexel University. Since all laboratory experimental results are made public, we refer to this work as Open Notebook Science as well. Cli
ChemSpider is a free access service providing a structure centric community for chemists. Providing access to millions of chemical structures and integration to a multitude of other online services ChemSpider is the richest single source of structure-base
Programs for Protein, DNA, and RNA structure determination by NMR Several groups at UC San Francisco have developped software useful for studying biomolecules with NMR. Software has been developped by
What I really wanted to do was to read a review on NMR software. I have been waiting for more than a decade; never seen a web review. During this prolonged period the things I wanted to read have increased up to the point that I am now able to write the r
Electronically organizes information that is typically stored in paper notebooks by incorporating MS Excel & Word, ChemDraw reactions, stoichiometry grids and spectral data.
HYDROPRO computes the hydrodynamic properties of rigid macromolecules (globular proteins, small nucleic acids, etc) from their atomic-level structure, as specified by the atomic coordinates taken from a PDB file supplied by the user, from which the proper
HBPLUS is a hydrogen bond calculation program that has been developed in-house over the course of over four years and has been used in countries as diverse as the USA, Taiwan and South Africa
Open Babel is a chemical toolbox designed to speak the many languages of chemical data. It's an open, collaborative project allowing anyone to search, convert, analyze, or store data from molecular modeling, chemistry, solid-state materials, biochemistry,
Sparky is a graphical NMR assignment and integration program for proteins, nucleic acids, and other polymers. For more information about what Sparky does look at the introduction in the manual. You may also be interested in other nmr software.
Chemical information is now seen as critical for most areas of life sciences. But unlike Bioinformatics, where data is openly available and freely re-usable, most chemical information is closed and cannot be re-distributed without permission. This has led