Existing functional description of genes are categorical, discrete, and mostly through manual process. In this work, we explore the idea of gene embedding, distributed representation of genes, in the spirit of word embedding.
%0 Journal Article
%1 du2019gene2vec
%A Du, Jingcheng
%A Jia, Peilin
%A Dai, Yulin
%A Tao, Cui
%A Zhao, Zhongming
%A Zhi, Degui
%D 2019
%J BMC Genomics
%K dna embedding gene gene2vec paper-dzhi
%N 1
%P 82--
%R 10.1186/s12864-018-5370-x
%T Gene2vec: distributed representation of genes based on co-expression
%U https://doi.org/10.1186/s12864-018-5370-x
%V 20
%X Existing functional description of genes are categorical, discrete, and mostly through manual process. In this work, we explore the idea of gene embedding, distributed representation of genes, in the spirit of word embedding.
@article{du2019gene2vec,
abstract = {Existing functional description of genes are categorical, discrete, and mostly through manual process. In this work, we explore the idea of gene embedding, distributed representation of genes, in the spirit of word embedding.},
added-at = {2020-01-17T11:43:59.000+0100},
author = {Du, Jingcheng and Jia, Peilin and Dai, Yulin and Tao, Cui and Zhao, Zhongming and Zhi, Degui},
biburl = {https://www.bibsonomy.org/bibtex/2a97c8180fa5ae06ff81bc43cca3ac304/nosebrain},
doi = {10.1186/s12864-018-5370-x},
interhash = {fe0a12f81eb2a876fc336f56c9839443},
intrahash = {a97c8180fa5ae06ff81bc43cca3ac304},
issn = {14712164},
journal = {BMC Genomics},
keywords = {dna embedding gene gene2vec paper-dzhi},
number = 1,
pages = {82--},
refid = {Du2019},
timestamp = {2020-01-17T11:44:29.000+0100},
title = {Gene2vec: distributed representation of genes based on co-expression},
url = {https://doi.org/10.1186/s12864-018-5370-x},
volume = 20,
year = 2019
}