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Remote homology detection: a motif based approach., and . ISMB (Supplement of Bioinformatics), page 26-33. (2003)Stochastic roadmap simulation: an efficient representation and algorithm for analyzing molecular motion., , , , and . RECOMB, page 12-21. ACM, (2002)SEQ: a nucleotide sequence analysis and recombination system., , , and . Nucleic Acids Res., 10 (1): 279-294 (1982)The EMOTIF database., and . Nucleic Acids Res., 29 (1): 202-204 (2001)Knowledge-based simulation of DNA metabolism: prediction of enzyme action., , and . Comput. Appl. Biosci., 7 (1): 9-19 (1991)BLAZETM: An Implementation of the Smith-Waterman Sequence Comparison Algorithm on a Massively Parallel Computer., , , , , and . Comput. Chem., 17 (2): 203-207 (1993)A Motion Planning Approach to Flexible Ligand Binding., , and . ISMB, page 252-261. AAAI, (1999)Capturing Molecular Energy Landscapes with Probabilistic Conformational Roadmaps., , , and . ICRA, page 932-939. IEEE, (2001)Identifying Protein-Protein Interaction Sites on a Genome-Wide Scale., , , , and . NIPS, page 1465-1472. (2004)Stochastic roadmap simulation for the study of ligand-protein interactions., , , , and . ECCB, page 18-26. (2002)