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Rational design of α-helical tandem repeat proteins with closed architectures., , , , , , and . Nat., 528 (7583): 585-588 (2015)Better together: Elements of successful scientific software development in a distributed collaborative community., , , , , , , , , and 16 other author(s). PLoS Comput. Biol., (2020)Comparing T cell receptor repertoires using optimal transport., , , , and . PLoS Comput. Biol., 18 (12): 1010681 (December 2022)Structure prediction for CASP7 targets using extensive all-atom refinement with Rosetta@home, , , , , , , , , and 7 other author(s). Proteins: Structure, Function, and Bioinformatics, 9999 (9999): NA (2007)Toward High-Resolution de Novo Structure Prediction for Small Proteins, , and . Science, 309 (5742): 1868--1871 (September 2005)Neural network models for sequence-based TCR and HLA association prediction., , and . PLoS Comput. Biol., (November 2023)Rosetta predictions in CASP5: Successes, failures, and prospects for complete automation, , , , , , , , , and 2 other author(s). Proteins: Structure, Function, and Genetics, 53 (S6): 457-468 (2003)How do amino acid mismatches affect the outcome of hematopoietic cell transplants?: a structural perspective., , , , and . BCB, page 627-633. ACM, (2010)Learning the shape of protein micro-environments with a holographic convolutional neural network., , , , , , , and . CoRR, (2022)