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Predicting enhancers in mammalian genomes using supervised hidden Markov models.

, , and . BMC Bioinform., 20 (1): 157:1-157:12 (2019)

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Detecting Functional Modules of Transcription Factor Binding Sites in the Human Genome., , and . Regulatory Genomics, volume 3318 of Lecture Notes in Computer Science, page 14-21. Springer, (2004)Contig selection in physical mapping., , , and . RECOMB, page 155-164. ACM, (2000)The Distance Precision Matrix: computing networks from non-linear relationships., , and . Bioinform., 35 (6): 1009-1017 (2019)Bioinformatics needs to adopt statistical thinking - Editorial.. Bioinform., 17 (5): 389-390 (2001)Towards detection of orthologues in sequence databases., , , and . Bioinform., 14 (3): 285-289 (1998)SVIM: structural variant identification using mapped long reads., and . Bioinform., 35 (17): 2907-2915 (2019)Developments in CORG: a gene-centric comparative genomics resource., , and . Nucleic Acids Res., 35 (Database-Issue): 32-35 (2007)The SYSTERS protein family database: Taxon-related protein family size distributions and singleton frequencies., , and . German Conference on Bioinformatics, page 103-108. (2003)Identifying splits with clear separation: a new class discovery method for gene expression data., , , and . ISMB (Supplement of Bioinformatics), page 107-114. (2001)coTRaCTE predicts co-occurring transcription factors within cell-type specific enhancers., , , and . PLoS Comput. Biol., (2018)