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Generic Properties of Chemical Networks: Artificial Chemistry Based on Graph Rewriting.

, , and . ECAL, volume 2801 of Lecture Notes in Computer Science, page 10-19. Springer, (2003)

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Atom Mapping with Constraint Programming., , , , , and . CP, volume 8124 of Lecture Notes in Computer Science, page 805-822. Springer, (2013)Explicit Collision Simulation of Chemical Reactions in a Graph Based Artificial Chemistry., , and . ECAL, volume 3630 of Lecture Notes in Computer Science, page 725-733. Springer, (2005)Using the RNA sequence-to-structure map for functional evolution of ribozyme catalyzed artificial metabolisms., , and . ALIFE, page 813. MIT Press, (2008)Towards an Optimal DNA-Templated Molecular Assembler., , , and . ALIFE, page 557-564. MIT Press, (2014)Efficient Algorithms for Co-folding of Multiple RNAs., , , and . BIOSTEC (Selected Papers), volume 1400 of Communications in Computer and Information Science, page 193-214. Springer, (2020)Density of States, Metastable States, and Saddle Points: Exploring the Energy Landscape of an RNA Molecule., , , and . ISMB, page 88-91. AAAI, (1997)The Graph Grammar Library - A Generic Framework for Chemical Graph Rewrite Systems., , and . ICMT, volume 7909 of Lecture Notes in Computer Science, page 52-53. Springer, (2013)In Silico Evolution of Early Metabolism., , , and . ALIFE, page 57-64. MIT Press, (2010)Maximizing output and recognizing autocatalysis in chemical reaction networks is NP-complete, , , and . J. Syst. Chem., (2012)Memory-efficient RNA energy landscape exploration., , , and . Bioinform., 30 (18): 2584-2591 (2014)