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Reconstructing the Phylogeny of Mobile Elements., , , and . RECOMB, volume 4453 of Lecture Notes in Computer Science, page 196-210. Springer, (2007)The Homology Kernel: A Biologically Motivated Sequence Embedding into Euclidean Space., and . CIBCB, page 179-186. IEEE, (2005)Identification of causal genes for complex traits., , , , and . Bioinform., 31 (12): 206-213 (2015)Incorporating prior information into association studies., , , and . Bioinform., 28 (12): 147-153 (2012)A Bayesian Framework for Estimating Cell Type Composition from DNA Methylation Without the Need for Methylation Reference., , , , and . RECOMB, volume 10229 of Lecture Notes in Computer Science, page 207-223. (2017)Using Network Component Analysis to Dissect Regulatory Networks Mediated by Transcription Factors in Yeast., , , and . PLoS Comput. Biol., (2009)Detecting Text Similarity over Short Passages: Exploring Linguistic Feature Combinations via Machine Learning., , and . EMNLP, Association for Computational Linguistics, (1999)Mismatch String Kernels for SVM Protein Classification., , , and . NIPS, page 1417-1424. MIT Press, (2002)Gene-Gene Interactions Detection Using a Two-Stage Model., , , , and . RECOMB, volume 8394 of Lecture Notes in Computer Science, page 340-355. Springer, (2014)Efficient Genome Wide Tagging by Reduction to SAT., , , , , and . WABI, volume 5251 of Lecture Notes in Computer Science, page 135-147. Springer, (2008)