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Design of nucleic acid strands with long low-barrier folding pathways.

, , and . Nat. Comput., 16 (2): 261-284 (2017)

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On the undecidability of probabilistic planning and related stochastic optimization problems., , and . Artif. Intell., 147 (1-2): 5-34 (2003)A System-Level Specification Framework for I/O Architectures., , , and . SPAA, page 138-147. ACM, (1999)Lamport Clocks: Verifying a Directory Cache-Coherence Protocol., , , and . SPAA, page 67-76. ACM, (1998)Toward a decidable notion of sequential consistency., , and . SPAA, page 304-313. ACM, (2003)Random Debaters and the Hardness of Approximating Stochastic Functions., , , and . SIAM J. Comput., 26 (2): 369-400 (1997)densityCut: an efficient and versatile topological approach for automatic clustering of biological data., , and . Bioinform., 32 (17): 2567-2576 (2016)Parsing Nucleic Acid Pseudoknotted Secondary Structure: Algorithm and Applications., and . J. Comput. Biol., 14 (1): 16-32 (2007)Reachability Bounds for Chemical Reaction Networks and Strand Displacement Systems., , and . DNA, volume 7433 of Lecture Notes in Computer Science, page 43-57. Springer, (2012)NP-Completeness of the Direct Energy Barrier Problem without Pseudoknots., , , and . DNA, volume 5877 of Lecture Notes in Computer Science, page 106-115. Springer, (2009)On Low Energy Barrier Folding Pathways for Nucleic Acid Sequences., and . DNA, volume 9211 of Lecture Notes in Computer Science, page 181-193. Springer, (2015)