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ScalpelSig Designs Targeted Genomic Panels from Data to Detect Activity of Mutational Signatures.

, , , and . J. Comput. Biol., 29 (1): 56-73 (2022)

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Fulgor: a fast and compact k-mer index for large-scale matching and color queries., , , , and . Algorithms Mol. Biol., 19 (1): 3 (December 2024)Spectrum Preserving Tilings Enable Sparse and Modular Reference Indexing., , , and . RECOMB, volume 13976 of Lecture Notes in Computer Science, page 21-40. Springer, (2023)ScalpelSig Designs Targeted Genomic Panels from Data to Detect Activity of Mutational Signatures., , , and . J. Comput. Biol., 29 (1): 56-73 (2022)Perplexity: Evaluating Transcript Abundance Estimation in the Absence of Ground Truth., , and . WABI, volume 201 of LIPIcs, page 4:1-4:22. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, (2021)Analyzing and indexing huge reference sequence collections.. University of Maryland, College Park, MD, USA, (2023)base-search.net (ftunivmaryland:oai:drum.lib.umd.edu:1903/31741).Meta-colored Compacted de Bruijn Graphs., , and . RECOMB, volume 14758 of Lecture Notes in Computer Science, page 131-146. Springer, (2024)A Multi-species Functional Embedding Integrating Sequence and Network Structure., , , , , , , and . RECOMB, volume 10812 of Lecture Notes in Computer Science, page 263-265. Springer, (2018)Perplexity: evaluating transcript abundance estimation in the absence of ground truth., , and . Algorithms Mol. Biol., 17 (1): 6 (2022)Fulgor: A Fast and Compact k-mer Index for Large-Scale Matching and Color Queries., , , , and . WABI, volume 273 of LIPIcs, page 18:1-18:21. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, (2023)