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Development of Novel Statistical Potentials Describing Cation-pi Interactions in Proteins and Comparison with Semiempirical and Quantum Chemistry Approaches.

, , , , and . Journal of Chemical Information and Modeling, 46 (2): 884-893 (2006)

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PoPMuSiC 2.1 : a web server for the estimation of protein stability changes upon mutation and sequence optimality., , , and . BMC Bioinform., (2011)Effective Harmonic Potentials: Insights into the Internal Cooperativity and Sequence-Specificity of Protein Dynamics., and . PLoS Comput. Biol., (2013)BeAtMuSiC: prediction of changes in protein-protein binding affinity on mutations., , , and . Nucleic Acids Res., 41 (Webserver-Issue): 333-339 (2013)Protein stability: a single recorded mutation aids in predicting the effects of other mutations in the same amino acid site., , , , and . Bioinform., 27 (23): 3286-3292 (2011)PoPMuSiC, rationally designing point mutations in protein structures., , , and . Bioinform., 18 (12): 1701-1702 (2002)Development of Novel Statistical Potentials Describing Cation-pi Interactions in Proteins and Comparison with Semiempirical and Quantum Chemistry Approaches., , , , and . Journal of Chemical Information and Modeling, 46 (2): 884-893 (2006)Identification of protein stability patches that pinpoint key structural or functional sites., , , and . BCB, page 521-523. ACM, (2012)Predicting protein stability changes upon mutation using a simple orientational potential., , , , and . Bioinform., (January 2023)Can Conformational Changes of Proteins Be Represented in Torsion Angle Space? A Study with Rescaled Ridge Regression., and . J. Chem. Inf. Model., 59 (11): 4929-4941 (2019)Local Normal Mode Analysis for Fast Loop Conformational Sampling., , , and . J. Chem. Inf. Model., 62 (18): 4561-4568 (2022)