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Bloom Filter Trie: an alignment-free and reference-free data structure for pan-genome storage.

, , and . Algorithms Mol. Biol., (2016)

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Alignment- and Reference-Free Phylogenomics with Colored de Bruijn Graphs.. WABI, volume 143 of LIPIcs, page 2:1-2:14. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, (2019)SANS serif: alignment-free, whole-genome-based phylogenetic reconstruction., and . Bioinform., 37 (24): 4868-4870 (2021)Consistency of Sequence-Based Gene Clusters., and . RECOMB-CG, volume 6398 of Lecture Notes in Computer Science, page 252-263. Springer, (2010)Dynamic Alignment-Free and Reference-Free Read Compression., , , and . J. Comput. Biol., 25 (7): 825-836 (2018)Unraveling overlapping deletions by agglomerative clustering.. BMC Genomics, 14 (S-1): S12 (2013)Consistency of Sequence-Based Gene Clusters., , , and . J. Comput. Biol., 18 (9): 1023-1039 (2011)Correction: Unraveling overlapping deletions by agglomerative clustering.. BMC Genomics, 14 (S-1): S16 (2013)