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MultiPaths: a Python framework for analyzing multi-layer biological networks using diffusion algorithms.

, , , , , and . Bioinform., 37 (1): 137-139 (2021)

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Exploring the known chemical space of the plant kingdom: insights into taxonomic patterns, knowledge gaps, and bioactive regions., , , , , and . J. Cheminformatics, 15 (1): 107 (December 2023)MultiPaths: a Python framework for analyzing multi-layer biological networks using diffusion algorithms., , , , , and . Bioinform., 37 (1): 137-139 (2021)CLEP: a hybrid data- and knowledge-driven framework for generating patient representations., , , , , , , and . Bioinform., 37 (19): 3311-3318 (2021)PathMe: merging and exploring mechanistic pathway knowledge., , , , and . BMC Bioinform., 20 (1): 243:1-243:12 (2019)Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures for drug discovery., , , , , , , , , and . PLoS Comput. Biol., (2022)Contextualizing and interpreting biological data with pathway knowledge and network algorithms. University of Bonn, Germany, (2023)base-search.net (ftunivbonn:oai:bonndoc.ulb.uni-bonn.de:20.500.11811/10617).Drug2ways: Reasoning over causal paths in biological networks for drug discovery., , , , and . PLoS Comput. Biol., (2020)Curating, Collecting, and Cataloguing Global COVID-19 Datasets for the Aim of Predicting Personalized Risk., , , , , , , , , and 9 other author(s). Data, 9 (2): 25 (2024)On the influence of several factors on pathway enrichment analysis., , , and . Briefings Bioinform., (2022)Elucidating gene expression patterns across multiple biological contexts through a large-scale investigation of transcriptomic datasets., , , , , , and . BMC Bioinform., 23 (1): 231 (2022)