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scGAD: single-cell gene associating domain scores for exploratory analysis of scHi-C data., , and . Bioinform., 38 (14): 3642-3644 (2022)Multiple Testing Methods For ChIP - Chip High Density Oligonucleotide Array Data., , , and . J. Comput. Biol., 13 (3): 579-613 (2006)Identification of regulatory elements using a feature selection method., , and . Bioinform., 18 (9): 1167-1175 (2002)Systematic evaluation of the impact of ChIP-seq read designs on genome coverage, peak identification, and allele-specific binding detection., , , , , and . BMC Bioinform., (2016)A MAD-Bayes Algorithm for State-Space Inference and Clustering with Application to Querying Large Collections of ChIP-Seq Data Sets., , and . RECOMB, volume 9649 of Lecture Notes in Computer Science, page 19-36. Springer, (2016)AdaLiftOver: high-resolution identification of orthologous regulatory elements with Adaptive liftOver., , and . Bioinform., (April 2023)atSNPInfrastructure, a Case Study for Searching Billions of Records While Providing Significant Cost Savings over Cloud Providers., , , , and . IPDPS Workshops, page 497-506. IEEE Computer Society, (2018)Regulatory motif finding by logic regression., , and . Bioinform., 20 (16): 2799-2811 (2004)CMARRT: A Tool of Analysis of CHIP-chip Data from Tiling Arrays by Incorporating the Correlation Structure., , and . Pacific Symposium on Biocomputing, page 515-526. World Scientific, (2008)Sparse partial least squares regression for simultaneous dimension reduction and variable selection, and . Journal of the Royal Statistical Society: Series B (Statistical Methodology), 72 (1): 3--25 (2010)