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An extensible interface for QM/MM molecular dynamics simulations with AMBER.

, , and . J. Comput. Chem., 35 (2): 95-108 (2014)

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An extensible interface for QM/MM molecular dynamics simulations with AMBER., , and . J. Comput. Chem., 35 (2): 95-108 (2014)Solvation thermodynamic mapping of molecular surfaces in AmberTools: GIST., , , , , and . J. Comput. Chem., 37 (21): 2029-2037 (2016)Improved Reweighting of Accelerated Molecular Dynamics Simulations for Free Energy Calculation, , , , , and . Journal of Chemical Theory and Computation, 10 (7): 2677-2689 (2014)PMID: 25061441.An investigation of the effects of error correcting code on GPU-accelerated molecular dynamics simulations., and . XSEDE, page 8:1-8:3. ACM, (2013)Implementing continuous integration software in an established computational chemistry software package., and . SE-CSE@ICSE, page 68-74. IEEE Computer Society, (2013)Transforming molecular biology research through extreme acceleration of AMBER molecular dynamics simulations: sampling for the 99%., , and . XSEDE, page 15:1. ACM, (2012)Molecular modeling suggests induced fit of Family I carbohydrate-binding modules with a broken-chain cellulose surface, , , , , , , , , and . Protein Engineering, Design and Selection, 20 (4): 179-187 (2007)Poster reception - High resolution, high throughput protein structure prediction using IBM Blue Gene supercomputers: predicting CASP targets in record time., , and . SC, page 165. ACM Press, (2006)SPFP: Speed without compromise - A mixed precision model for GPU accelerated molecular dynamics simulations., , and . Comput. Phys. Commun., 184 (2): 374-380 (2013)