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Computing with Proteins., , and . Computer, 42 (1): 47-56 (2009)NeuroML: A Language for Describing Data Driven Models of Neurons and Networks with a High Degree of Biological Detail, , , , , , , , , and 3 other author(s). PLoS Comput Biol, 6 (6): e1000815 (June 2010)Memory Switches in Chemical Reaction Space., and . PLoS Comput. Biol., (2008)Signaling in small subcellular volumes. I. Stochastic and diffusion effects on individual pathways.. Biophys. J., 87 (2): 733--744 (August 2004)Molecules, Networks, and Memory. Systems Biology, chapter 16, Springer Japan, Tokyo, (2009)Role of DARPP-32 and ARPP-21 in the Emergence of Temporal Constraints on Striatal Calcium and Dopamine Integration., , and . PLoS Comput. Biol., (2016)Signaling in small subcellular volumes. II. Stochastic and diffusion effects on synaptic network properties.. Biophys. J., 87 (2): 745--753 (August 2004)Efficient Integration of Coupled Electrical-Chemical Systems in Multiscale Neuronal Simulations., , , , and . Frontiers Comput. Neurosci., (2016)Minimum Information About a Simulation Experiment (MIASE)., , , , , , , , , and 18 other author(s). PLoS computational biology, 7 (4): e1001122+ (Apr 28, 2011)PyMOOSE: interoperable scripting in Python for MOOSE., and . Frontiers Neuroinformatics, (2008)